RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 SERPINB12Q96P63 405 aa16.64■□□□□ 0.25
PRKN-209ENST00000612485 SMAD5Q99717 465 aaKnown RBP16.64■□□□□ 0.25
PRKN-209ENST00000612485 C5AR2Q9P296 337 aa16.64■□□□□ 0.25
PRKN-209ENST00000612485 GOLGA6L10A0A0M3HER8 536 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 FITM1A5D6W6 292 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 GOLGA8MH3BSY2 632 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 CNOT3O75175 753 aaKnown RBP16.63■□□□□ 0.25
PRKN-209ENST00000612485 VPS4BO75351 444 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 USP1O94782 785 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 ONECUT2O95948 504 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 CATP04040 527 aaKnown RBP16.63■□□□□ 0.25
PRKN-209ENST00000612485 PSMB5P28074 263 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 CMPK1P30085 196 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 KLHL38Q2WGJ6 581 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 ACSBG2Q5FVE4 666 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 DCAF10Q5QP82 559 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 VWA5B1Q5TIE3 1220 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 NEK10Q6ZWH5 1172 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 OVCH1Q7RTY7 1134 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 LMNTD2Q8IXW0 634 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 OR2A1Q8NGT9 310 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 TRIM56Q9BRZ2 755 aaKnown RBP16.63■□□□□ 0.25
PRKN-209ENST00000612485 CCDC68Q9H2F9 335 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 WDR54Q9H977 334 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 SLC22A11Q9NSA0 550 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 P4HTMQ9NXG6 502 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 IL1RAPL1Q9NZN1 696 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 KLHL42Q9P2K6 505 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 VPS4AQ9UN37 437 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 NEU2Q9Y3R4 380 aa16.63■□□□□ 0.25
PRKN-209ENST00000612485 A0A1W2PPV9 198 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 KRT87PA6NCN2 255 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 ZNF839A8K0R7 811 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 ARHGEF33A8MVX0 844 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 MYO1CO00159 1063 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 CTSVO60911 334 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 PHF2O75151 1096 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 PSIP1O75475 530 aaKnown RBP16.62■□□□□ 0.25
PRKN-209ENST00000612485 SORBS2O94875 1100 aaKnown RBP16.62■□□□□ 0.25
PRKN-209ENST00000612485 ALPPP05187 535 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 UMODP07911 640 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 ERGP11308 486 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 MCM3P25205 808 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 HSD17B2P37059 387 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 FNTAP49354 379 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 VSX2P58304 361 aaPredicted RBP16.62■□□□□ 0.25
PRKN-209ENST00000612485 RAPSNQ13702 412 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 FASTKQ14296 549 aaKnown RBP16.62■□□□□ 0.25
PRKN-209ENST00000612485 ARHGAP19Q14CB8 494 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.62■□□□□ 0.25
PRKN-209ENST00000612485 JMJD6Q6NYC1 403 aaPredicted RBP16.62■□□□□ 0.25
PRKN-209ENST00000612485 PPP1R32Q7Z5V6 425 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 GALNT16Q8N428 558 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 CALML6Q8TD86 181 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 ACTRT1Q8TDG2 376 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 SMPDL3AQ92484 453 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 OSBPL9Q96SU4 736 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 SLC26A1Q9H2B4 701 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 GALPQ9UBC7 116 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 NXT1Q9UKK6 140 aaKnown RBP16.62■□□□□ 0.25
PRKN-209ENST00000612485 MAD1L1Q9Y6D9 718 aa16.62■□□□□ 0.25
PRKN-209ENST00000612485 A0A0J9YVX5 310 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 ZCWPW2A0A1B0GU75 182 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 ZSCAN12O43309 604 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 ITGAXP20702 1163 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 RPA3P35244 121 aaPredicted RBP16.61■□□□□ 0.25
PRKN-209ENST00000612485 MAGEA3P43357 314 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 CLCN7P51798 805 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 MYBPC3Q14896 1274 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 LONRF1Q17RB8 773 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 WASHC2DQ5SRD0 308 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 RNF44Q7L0R7 432 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 DENND6AQ8IWF6 608 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 SLC35F6Q8N357 371 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 FAM26EQ8N5C1 309 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 NAT8LQ8N9F0 302 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 GALNT11Q8NCW6 608 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 KCNJ9Q92806 393 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 PNPLA2Q96AD5 504 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 ATP13A2Q9NQ11 1180 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 SLAMF7Q9NQ25 335 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 FBXO6Q9NRD1 293 aaPredicted RBP16.61■□□□□ 0.25
PRKN-209ENST00000612485 C20orf96Q9NUD7 363 aaPredicted RBP16.61■□□□□ 0.25
PRKN-209ENST00000612485 ANKMY1Q9P2S6 941 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 COMMD10Q9Y6G5 202 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 HECTD1Q9ULT8 2610 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 PCSK5Q92824 1860 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 FLNCQ14315 2725 aa16.61■□□□□ 0.25
PRKN-209ENST00000612485 HYKKA2RU49 373 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 OR2A25A4D2G3 310 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 CLEC18AA5D8T8 446 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 AGPSO00116 658 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 CES2O00748 559 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 KIF5CO60282 957 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 VPS26AO75436 327 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 IPO13O94829 963 aaKnown RBP16.6■□□□□ 0.25
PRKN-209ENST00000612485 CCNDBP1O95273 360 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 ERVK-10P10266 1014 aa16.6■□□□□ 0.25
PRKN-209ENST00000612485 ENO3P13929 434 aaPredicted RBP16.6■□□□□ 0.25
PRKN-209ENST00000612485 MMP11P24347 488 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms