RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 MKRN2OSH3BPM6 223 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 KIF2AO00139 706 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MYO1CO00159 1063 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 URI1O94763 535 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 FAM87AP0C7U9 286 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 TPBGLP0DKB5 382 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CCND1P24385 295 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 PEBP1P30086 187 aaKnown RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 RPL21P46778 160 aaKnown RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ABATP80404 500 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 DCDP81605 110 aaKnown RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 KCNAB2Q13303 367 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 FRG1Q14331 258 aaKnown RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 GRB7Q14451 532 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MSS51Q4VC12 460 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 RHBDD2Q6NTF9 364 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 C8orf74Q6P047 294 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 FAM199XQ6PEV8 388 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CEP128Q6ZU80 1094 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ADCK2Q7Z695 626 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 SLC26A11Q86WA9 606 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MCATQ8IVS2 390 aaKnown RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 AGGF1Q8N302 714 aaeCLIP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 DNAJC22Q8N4W6 341 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ZNF655Q8N720 491 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 OR2L3Q8NG85 312 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ZNF592Q92610 1267 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 RERGQ96A58 199 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 VPS50Q96JG6 964 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 C16orf45Q96MC5 204 aaPredicted RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 IP6K3Q96PC2 410 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 NDNQ99608 321 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 NRTNQ99748 197 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MENTQ9BUN1 341 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 PCBD2Q9H0N5 130 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 FAM60AQ9NP50 221 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 ABCF3Q9NUQ8 709 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 PCMTD2Q9NV79 361 aa11.86□□□□□ -0.51
CBWD3-208ENST00000612050 GEMIN8Q9NWZ8 242 aaKnown RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 MRPS18BQ9Y676 258 aaKnown RBP11.86□□□□□ -0.51
CBWD3-208ENST00000612050 CELSR3Q9NYQ7 3312 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 TXNDC9O14530 226 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 SLC16A5O15375 505 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 PRPF4O43172 522 aaKnown RBP eCLIP11.85□□□□□ -0.51
CBWD3-208ENST00000612050 IGHEP01854 428 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 AHSGP02765 367 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 ITGAXP20702 1163 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 HRH2P25021 359 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 RRADP55042 308 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 NFATC3Q12968 1075 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 NCF4Q15080 339 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 UGT8Q16880 541 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 LINC00303Q3SY05 128 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 TEDDM1Q5T9Z0 273 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 MLIPQ5VWP3 458 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 ZNF549Q6P9A3 640 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 ENDOVQ8N8Q3 282 aaKnown RBP11.85□□□□□ -0.51
CBWD3-208ENST00000612050 MNS1Q8NEH6 495 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 FLVCR1-AS1Q8TAF5 88 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 C9orf43Q8TAL5 461 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-208ENST00000612050 ASB11Q8WXH4 323 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 LINGO1Q96FE5 620 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 CCDC138Q96M89 665 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 PKP4Q99569 1192 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 ACAT2Q9BWD1 397 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 SLC25A18Q9H1K4 315 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 CCDC177Q9NQR7 707 aaPredicted RBP11.85□□□□□ -0.51
CBWD3-208ENST00000612050 ACSS2Q9NR19 701 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 GALPQ9UBC7 116 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 VWA7Q9Y334 891 aa11.85□□□□□ -0.51
CBWD3-208ENST00000612050 A0A1B0GX78 115 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 PEX12O00623 359 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 RAD51CO43502 376 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 KLHL41O60662 606 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 RFPL1O75677 317 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 SLC16A8O95907 504 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 PRB1P04280 392 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 GSTA2P09210 222 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 ERGP11308 486 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 SAT1P21673 171 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 F8A1P23610 371 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 RORAP35398 523 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 GRK3P35626 688 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 FOLR3P41439 243 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 GRIA3P42263 894 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 ZIC1Q15915 447 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 WHAMMP3Q1A5X7 153 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 PTCHD3Q3KNS1 767 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 CCSMST1Q4G0I0 132 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.84□□□□□ -0.51
CBWD3-208ENST00000612050 HECTD2Q5U5R9 776 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 PRAMEF17Q5VTA0 474 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 C1orf189Q5VU69 101 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 STEAP4Q687X5 459 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 SUSD1Q6UWL2 747 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 TTLL10Q6ZVT0 673 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 STRA8Q7Z7C7 330 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 FAM20CQ8IXL6 584 aa11.84□□□□□ -0.51
CBWD3-208ENST00000612050 C17orf53Q8N3J3 647 aaPredicted RBP11.84□□□□□ -0.51
CBWD3-208ENST00000612050 ZNF843Q8N446 348 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms