RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 SUN1O94901 812 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 F10P00742 488 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 PPARGP37231 505 aaPredicted RBP13.17□□□□□ -0.3
LINC00116-203ENST00000611969 ARG2P78540 354 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 ITIH4Q14624 930 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 POU6F1Q14863 301 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 OASLQ15646 514 aaKnown RBP13.17□□□□□ -0.3
LINC00116-203ENST00000611969 NKG7Q16617 165 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 ZNF658BQ4V348 819 aaPredicted RBP13.17□□□□□ -0.3
LINC00116-203ENST00000611969 DTWD1Q8N5C7 304 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.17□□□□□ -0.3
LINC00116-203ENST00000611969 C14orf79Q96F83 325 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 DNAJC1Q96KC8 554 aaKnown RBP13.17□□□□□ -0.3
LINC00116-203ENST00000611969 NDC1Q9BTX1 674 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 MVB12BQ9H7P6 319 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 COG4Q9H9E3 785 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 DRG1Q9Y295 367 aaKnown RBP13.17□□□□□ -0.3
LINC00116-203ENST00000611969 ZKSCAN5Q9Y2L8 839 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 ABCA2Q9BZC7 2435 aa13.17□□□□□ -0.3
LINC00116-203ENST00000611969 A0A0U1RQJ8 604 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 TCRBV7S2A1N4TA0A589 114 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 AP3B1O00203 1094 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
LINC00116-203ENST00000611969 NRDCO43847 1150 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 CAPN3P20807 821 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 ADRA1DP25100 572 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 PDHA2P29803 388 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 TNFSF10P50591 281 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 GDF10P55107 478 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 TLE4Q04727 773 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 BOP1Q14137 746 aaKnown RBP13.16□□□□□ -0.3
LINC00116-203ENST00000611969 INAQ16352 499 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 RBBP7Q16576 425 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 CCNG2Q16589 344 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 MEI1Q5TIA1 1274 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 MTFR2Q6P444 385 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 TLDC1Q6P9B6 456 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 DRICH1Q6PGQ1 229 aaPredicted RBP13.16□□□□□ -0.3
LINC00116-203ENST00000611969 NCCRP1Q6ZVX7 275 aaPredicted RBP13.16□□□□□ -0.3
LINC00116-203ENST00000611969 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 DNAJC22Q8N4W6 341 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 METTL27Q8N6F8 245 aaPredicted RBP13.16□□□□□ -0.3
LINC00116-203ENST00000611969 PEX13Q92968 403 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 NACC2Q96BF6 587 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 MTFMTQ96DP5 389 aaKnown RBP13.16□□□□□ -0.3
LINC00116-203ENST00000611969 WDR54Q9H977 334 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 ETNK1Q9HBU6 452 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 MRM3Q9HC36 420 aaKnown RBP13.16□□□□□ -0.3
LINC00116-203ENST00000611969 ZNF160Q9HCG1 818 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 HOMER3Q9NSC5 361 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 SMARCAL1Q9NZC9 954 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 PAK5Q9P286 719 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 TINAGQ9UJW2 476 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 NEU2Q9Y3R4 380 aa13.16□□□□□ -0.3
LINC00116-203ENST00000611969 A0A0J9YY10 115 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 A0A1B0GX78 115 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 NADKO95544 446 aaPredicted RBP13.15□□□□□ -0.3
LINC00116-203ENST00000611969 IFNB1P01574 187 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 FTH1P02794 183 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 CHRM5P08912 532 aaPredicted RBP13.15□□□□□ -0.3
LINC00116-203ENST00000611969 CCDC175P0C221 793 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 OR56A5P0C7T3 313 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 ALAS2P22557 587 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 MSNP26038 577 aaKnown RBP13.15□□□□□ -0.3
LINC00116-203ENST00000611969 PEBP1P30086 187 aaKnown RBP13.15□□□□□ -0.3
LINC00116-203ENST00000611969 SOX11P35716 441 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 CDKN1CP49918 316 aaPredicted RBP13.15□□□□□ -0.3
LINC00116-203ENST00000611969 PMP22Q01453 160 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 C3AR1Q16581 482 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 XKRXQ6PP77 449 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 PPP1R21Q6ZMI0 780 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 UNC5AQ6ZN44 842 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 TTLL10Q6ZVT0 673 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 CEP97Q8IW35 865 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
LINC00116-203ENST00000611969 OR52K1Q8NGK4 314 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 OR5AR1Q8NGP9 310 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 PSMF1Q92530 271 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 TFGQ92734 400 aaPredicted RBP13.15□□□□□ -0.3
LINC00116-203ENST00000611969 LMF1Q96S06 567 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 CHRNA10Q9GZZ6 450 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 RAB6BQ9NRW1 208 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 PTGFRNQ9P2B2 879 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 KLHL20Q9Y2M5 609 aa13.15□□□□□ -0.3
LINC00116-203ENST00000611969 TRAV17A0A0B4J275 112 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 A0A1B0GTL3 188 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 CCL22O00626 93 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 KDM1AO60341 852 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 SLC19A2O60779 497 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 TPBGLP0DKB5 382 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 MCM3P25205 808 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 DBN1Q16643 649 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 TSTD2Q5T7W7 516 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 PACS1Q6VY07 963 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 PIANPQ8IYJ0 282 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 CLDN19Q8N6F1 224 aa13.14□□□□□ -0.31
LINC00116-203ENST00000611969 AMER2Q8N7J2 671 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms