RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 ASAH2Q9NR71 780 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 ADPRHL2Q9NX46 363 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 CMTM6Q9NX76 183 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 CLDND1Q9NY35 253 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 SCN3BQ9NY72 215 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 TMOD3Q9NYL9 352 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 NYAP2Q9P242 653 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 KIF17Q9P2E2 1029 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 SAE1Q9UBE0 346 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 DNAJB9Q9UBS3 223 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 NARFQ9UHQ1 456 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 TMPRSS11EQ9UL52 423 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZBTB21Q9ULJ3 1066 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 TBX20Q9UMR3 447 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 MAPRE3Q9UPY8 281 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 PCDHA1Q9Y5I3 950 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 LYVE1Q9Y5Y7 322 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 STON1Q9Y6Q2 735 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 RNF215Q9Y6U7 377 aa3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 MYO18AQ92614 2054 aaKnown RBP3.98□□□□□ -1.77
HMGB1P50-201ENST00000605814 SCN9AQ15858 1988 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 LOC100130705A0A1B0GUX0 176 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 OR2A25A4D2G3 310 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 EFCAB9A8MZ26 197 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 H3BQ06 376 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 K7ENM7 598 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 FXYD1O00168 92 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 IFRD1O00458 451 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 TOR1BO14657 336 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 ABCD4O14678 606 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 DSCR3O14972 297 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARPC2O15144 300 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 KCNN4O15554 427 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 B4GAT1O43505 415 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 DLX3O60479 287 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 VPS4BO75351 444 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 SERPINI2O75830 405 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 OR2B3O76000 313 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 PDE9AO76083 593 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 FGF18O76093 207 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 METTL18O95568 372 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 CLIC3O95833 236 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 ECDO95905 644 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 TGM6O95932 706 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 PAHP00439 452 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 PIGRP01833 764 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 HLA-DRAP01903 254 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 LTFP02788 710 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 POLBP06746 335 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 CHRNGP07510 517 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 APRTP07741 180 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 PSKH1P11801 424 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 NCF1P14598 390 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 STMN1P16949 149 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 ITGB6P18564 788 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 RAB3AP20336 220 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 CD72P21854 359 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 F8A1P23610 371 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 ATP5F1P24539 256 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 PSMA2P25787 234 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 PTBP1P26599 531 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRDX5P30044 214 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 MIPP30301 263 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 LRPAP1P30533 357 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 TGFBR2P37173 567 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 GRIA1P42261 906 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 ABCG1P45844 678 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC15A1P46059 708 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 ATP5OP48047 213 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 RFX2P48378 723 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 SOX9P48436 509 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 PPP3CCP48454 512 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 NPY2RP49146 381 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 RARRES1P49788 294 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 KPNA2P52292 529 aaKnown RBP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC7A2P52569 658 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 NAGLUP54802 743 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 VBP1P61758 197 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 RHAGQ02094 409 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 EMX2Q04743 252 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 SCRN3Q0VDG4 424 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 CAMK1Q14012 370 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 KEAP1Q14145 624 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 EFR3AQ14156 821 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 FHL2Q14192 279 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 GNA13Q14344 377 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 MEP1AQ16819 746 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 CYP51A1Q16850 503 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 CTU2Q2VPK5 515 aaKnown RBP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 NRN1LQ496H8 165 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 SV2CQ496J9 727 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 BCL7AQ4VC05 210 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 DALRD3Q5D0E6 543 aaKnown RBP3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 TOR2AQ5JU69 321 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 KCNT1Q5JUK3 1230 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 CLLU1Q5K131 121 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 SPANXN2Q5MJ10 180 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 TMEM198Q66K66 360 aa3.97□□□□□ -1.77
HMGB1P50-201ENST00000605814 VASNQ6EMK4 673 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms