RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 B3GALNT2Q8NCR0 500 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 ABHD17AQ96GS6 310 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 DUSP16Q9BY84 665 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 PITPNM3Q9BZ71 974 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 REXO4Q9GZR2 422 aaKnown RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 PLAC1Q9HBJ0 212 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 GOLGA2P5Q9HBQ8 144 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 FAM212BQ9NTI7 297 aaPredicted RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 CDH9Q9ULB4 789 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 ABT1Q9ULW3 272 aaKnown RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 TNPO3Q9Y5L0 923 aaKnown RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 ZNF638Q14966 1978 aaKnown RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 OR6C75A6NL08 312 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 J3QRK9 145 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 SGCEO43556 437 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 LZTS3O60299 673 aaPredicted RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 HUS1O60921 280 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 ABLIM3O94929 683 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 NADKO95544 446 aaPredicted RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 LCP1P13796 627 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 CBR1P16152 277 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 CBLP22681 906 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 CA4P22748 312 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 CYP2C18P33260 490 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 UGT2B10P36537 528 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 RHDQ02161 417 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 TEKQ02763 1124 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 SEC23BQ15437 767 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 ZNF385CQ66K41 422 aaPredicted RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 ATG16L1Q676U5 607 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 ZFP1Q6P2D0 407 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 BRAT1Q6PJG6 821 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 C17orf99Q6UX52 265 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 GPR155Q7Z3F1 870 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 SZRD1Q7Z422 152 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 CCDC185Q8N715 623 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 AKR7LQ8NHP1 331 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 PNPT1Q8TCS8 783 aaKnown RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 SLC13A3Q8WWT9 602 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 ATP2A3Q93084 1043 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 FBXL8Q96CD0 374 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 SLC7A6OSQ96CW6 309 aaPredicted RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 MAGEB5Q9BZ81 275 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 DHX35Q9H5Z1 703 aaKnown RBP7.45□□□□□ -1.22
HCG18-244ENST00000602516 CAB39LQ9H9S4 337 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 POPDC2Q9HBU9 364 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 FZD10Q9ULW2 581 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 TRAF6Q9Y4K3 522 aa7.45□□□□□ -1.22
HCG18-244ENST00000602516 MFSD2BA6NFX1 497 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 ZNF839A8K0R7 811 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 HACD1B0YJ81 288 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 SCAMP1O15126 338 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 CASC3O15234 703 aaKnown RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 ASNA1O43681 348 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 AKAP8O43823 692 aaKnown RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 EDF1O60869 148 aaKnown RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 AVILO75366 819 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 MED6O75586 246 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 STAG3L3P0CL85 134 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 MBL2P11226 248 aaPredicted RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 IFI30P13284 250 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 TPSB2P20231 275 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 PRKCHP24723 683 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 PCSK1P29120 753 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 CCR5P51681 352 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 SLC18A2Q05940 514 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 SF3A3Q12874 501 aaKnown RBP eCLIP7.44□□□□□ -1.22
HCG18-244ENST00000602516 MTM1Q13496 603 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 INPP5AQ14642 412 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 TPSAB1Q15661 275 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 OTUD1Q5VV17 481 aaPredicted RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 NCBP2-AS2Q69YL0 99 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 PIGZQ86VD9 579 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 NUDT13Q86X67 352 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 KIF18BQ86Y91 864 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 DNAJC5GQ8N7S2 189 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 ZNF781Q8N8C0 355 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 MAGEE2Q8TD90 523 aaPredicted RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 CPNE4Q96A23 557 aaPredicted RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 C5orf34Q96MH7 638 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 QKIQ96PU8 341 aaKnown RBP eCLIP7.44□□□□□ -1.22
HCG18-244ENST00000602516 TTLL2Q9BWV7 592 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 TRIM54Q9BYV2 358 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 ANLNQ9NQW6 1124 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 ARHGEF4Q9NR80 690 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 ELOVL2Q9NXB9 296 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 GMPR2Q9P2T1 348 aaKnown RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 CTSFQ9UBX1 484 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 SCN10AQ9Y5Y9 1956 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 COL4A4P53420 1690 aaPredicted RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 TP53BP1Q12888 1972 aaPredicted RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 TMX2-CTNND1H3BSU7 103 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 ARVCFO00192 962 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 SCAMP2O15127 329 aaKnown RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 TCAPO15273 167 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 MITFO75030 526 aaPredicted RBP7.44□□□□□ -1.22
HCG18-244ENST00000602516 PIAS1O75925 651 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 FBP1P09467 338 aa7.44□□□□□ -1.22
HCG18-244ENST00000602516 PTPN1P18031 435 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms