RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 OTX2P32243 289 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 SLC1A2P43004 574 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 SLC9A5Q14940 896 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 IGFBP7Q16270 282 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 TTLL9Q3SXZ7 439 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.45□□□□□ -0.1
LIG1-215ENST00000597901 TCTE1Q5JU00 501 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 WASHC2DQ5SRD0 308 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 PCGF5Q86SE9 256 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 RAB43Q86YS6 212 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 TMEM102Q8N9M5 508 aaPredicted RBP14.45□□□□□ -0.1
LIG1-215ENST00000597901 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.45□□□□□ -0.1
LIG1-215ENST00000597901 ASB11Q8WXH4 323 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 SMPDL3AQ92484 453 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 DLG3Q92796 817 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 KCNJ9Q92806 393 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 SLCO2A1Q92959 643 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 PTERQ96BW5 349 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 SELENOSQ9BQE4 189 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 FAM114A2Q9NRY5 505 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 IARS2Q9NSE4 1012 aaKnown RBP14.45□□□□□ -0.1
LIG1-215ENST00000597901 NDOR1Q9UHB4 597 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 ASIC3Q9UHC3 531 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 COMMD10Q9Y6G5 202 aa14.45□□□□□ -0.1
LIG1-215ENST00000597901 TLN1Q9Y490 2541 aaKnown RBP14.44□□□□□ -0.1
LIG1-215ENST00000597901 A6NL46 340 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 GFYI3L273 518 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 MYO1CO00159 1063 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 CATP04040 527 aaKnown RBP14.44□□□□□ -0.1
LIG1-215ENST00000597901 MPC1LP0DKB6 136 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 ERGP11308 486 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 PGAM1P18669 254 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 ITGAXP20702 1163 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 HSD17B2P37059 387 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 FOLR3P41439 243 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 PGDP52209 483 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 VSX2P58304 361 aaPredicted RBP14.44□□□□□ -0.1
LIG1-215ENST00000597901 GNG11P61952 73 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 MPP1Q00013 466 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 DHX9Q08211 1270 aaKnown RBP14.44□□□□□ -0.1
LIG1-215ENST00000597901 ATP1A4Q13733 1029 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 PTK6Q13882 451 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 GRM7Q14831 915 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 ARHGAP19Q14CB8 494 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 FAM214AQ32MH5 1076 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 MSS51Q4VC12 460 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 YOD1Q5VVQ6 348 aaPredicted RBP14.44□□□□□ -0.1
LIG1-215ENST00000597901 PAPD7Q5XG87 772 aaKnown RBP14.44□□□□□ -0.1
LIG1-215ENST00000597901 SUSD1Q6UWL2 747 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 OVCH1Q7RTY7 1134 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 CREG2Q8IUH2 290 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 TMEM151BQ8IW70 566 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 OR2Y1Q8NGV0 311 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 GIMAP7Q8NHV1 300 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 IP6K3Q96PC2 410 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 GPR21Q99679 349 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 EBNA1BP2Q99848 306 aaKnown RBP14.44□□□□□ -0.1
LIG1-215ENST00000597901 ACAT2Q9BWD1 397 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 CUTCQ9NTM9 273 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 SPTBP11277 2137 aa14.44□□□□□ -0.1
LIG1-215ENST00000597901 LOC105369274A0A096LPK9 316 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 LOC102723532A0A0G2JNH3 316 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 A0A0J9YVX5 310 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 A0A1B0GX78 115 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 FITM1A5D6W6 292 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 DSCR3O14972 297 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 ZBTB14O43829 449 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 BANF1O75531 89 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 ERVK-10P10266 1014 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 PIM1P11309 404 aaPredicted RBP14.43□□□□□ -0.1
LIG1-215ENST00000597901 ENO3P13929 434 aaPredicted RBP14.43□□□□□ -0.1
LIG1-215ENST00000597901 CMPK1P30085 196 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 PNLIPRP1P54315 467 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 RRADP55042 308 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 FOXL2P58012 376 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 FOXK1P85037 733 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 CUL1Q13616 776 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 FRMPD2BQ6IN97 320 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 KCNMB4Q86W47 210 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 IGDCC3Q8IVU1 814 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 KLHL7Q8IXQ5 586 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 OR4N4Q8N0Y3 316 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 TTC29Q8NA56 475 aaPredicted RBP14.43□□□□□ -0.1
LIG1-215ENST00000597901 FBXO15Q8NCQ5 510 aaPredicted RBP14.43□□□□□ -0.1
LIG1-215ENST00000597901 C2CD4AQ8NCU7 369 aaPredicted RBP14.43□□□□□ -0.1
LIG1-215ENST00000597901 FDCSPQ8NFU4 85 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 ANP32BQ92688 251 aaKnown RBP14.43□□□□□ -0.1
LIG1-215ENST00000597901 CAPZA3Q96KX2 299 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 FAM167BQ9BTA0 163 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 AARSD1Q9BTE6 412 aaKnown RBP14.43□□□□□ -0.1
LIG1-215ENST00000597901 DPH7Q9BTV6 452 aa14.43□□□□□ -0.1
LIG1-215ENST00000597901 ZC3H7BQ9UGR2 993 aaKnown RBP14.43□□□□□ -0.1
LIG1-215ENST00000597901 BOD1L1Q8NFC6 3051 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 HYKKA2RU49 373 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 OR2A25A4D2G3 310 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 E7ENX8 843 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 PEX12O00623 359 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 NRP2O60462 931 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 TTC4O95801 387 aa14.42□□□□□ -0.1
LIG1-215ENST00000597901 SLC16A8O95907 504 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms