RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 SCARF2Q96GP6 870 aaPredicted RBP12.47□□□□□ -0.41
SCAF1-202ENST00000595242 LURAP1Q96LR2 239 aa12.47□□□□□ -0.41
SCAF1-202ENST00000595242 RMDN2Q96LZ7 410 aa12.47□□□□□ -0.41
SCAF1-202ENST00000595242 NUDT9Q9BW91 350 aa12.47□□□□□ -0.41
SCAF1-202ENST00000595242 GPR87Q9BY21 358 aa12.47□□□□□ -0.41
SCAF1-202ENST00000595242 STN1Q9H668 368 aaKnown RBP12.47□□□□□ -0.41
SCAF1-202ENST00000595242 MID2Q9UJV3 735 aa12.47□□□□□ -0.41
SCAF1-202ENST00000595242 G3BP2Q9UN86 482 aaKnown RBP12.47□□□□□ -0.41
SCAF1-202ENST00000595242 SEC16AO15027 2179 aa12.47□□□□□ -0.41
SCAF1-202ENST00000595242 SPG11Q96JI7 2443 aa12.47□□□□□ -0.41
SCAF1-202ENST00000595242 PCSK5Q92824 1860 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 A0A096LPK6 155 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 LRRTM2O43300 516 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 AHSGP02765 367 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 C2P06681 752 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 FGF5P12034 268 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 ALDH3A1P30838 453 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 SKIV2L2P42285 1042 aaKnown RBP12.46□□□□□ -0.41
SCAF1-202ENST00000595242 RGRP47804 291 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 SCTRP47872 440 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 CD151P48509 253 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 GFERP55789 205 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 PER3P56645 1201 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 BST1Q10588 318 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 BNIP1Q12981 228 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 THOC5Q13769 683 aaKnown RBP12.46□□□□□ -0.41
SCAF1-202ENST00000595242 PYCR3Q53H96 274 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 RAET1GQ6H3X3 334 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 NEPROQ6NW34 567 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 FAM199XQ6PEV8 388 aaPredicted RBP12.46□□□□□ -0.41
SCAF1-202ENST00000595242 CCDC91Q7Z6B0 441 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 PPP1R3BQ86XI6 285 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 NUDCD3Q8IVD9 361 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 GPR150Q8NGU9 434 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 BRSK1Q8TDC3 778 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 SIKE1Q9BRV8 207 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 MECRQ9BV79 373 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 TBC1D10AQ9BXI6 508 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 TDRD1Q9BXT4 1180 aaKnown RBP12.46□□□□□ -0.41
SCAF1-202ENST00000595242 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.46□□□□□ -0.41
SCAF1-202ENST00000595242 EPB41L1Q9H4G0 881 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 AKIRIN1Q9H9L7 192 aaPredicted RBP12.46□□□□□ -0.41
SCAF1-202ENST00000595242 KCTD5Q9NXV2 234 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 TMEM216Q9P0N5 145 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 COPG2Q9UBF2 871 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 B4GALT6Q9UBX8 382 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 FBXO5Q9UKT4 447 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 TMEM98Q9Y2Y6 226 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 CNTRLQ7Z7A1 2325 aa12.46□□□□□ -0.41
SCAF1-202ENST00000595242 FAM95CA0A1B0GW59 222 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 A6NL46 340 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 ANKRD65E5RJM6 399 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 DIAPH2O60879 1101 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 UBOX5O94941 541 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 C9P02748 559 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 SERPINE1P05121 402 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 GRK2P25098 689 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 CRABP2P29373 138 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 ETV3P41162 512 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 CSNK1DP48730 415 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 RPS15P62841 145 aaKnown RBP12.45□□□□□ -0.42
SCAF1-202ENST00000595242 TMPRSS15P98073 1019 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 POU4F1Q01851 419 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 BCL2L1Q07817 233 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 LRP8Q14114 963 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 CHI3L2Q15782 390 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCAF1-202ENST00000595242 FASTKD1Q53R41 847 aaKnown RBP12.45□□□□□ -0.42
SCAF1-202ENST00000595242 CES4AQ5XG92 561 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 FAM91A1Q658Y4 838 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 IYDQ6PHW0 289 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 SLC9B2Q86UD5 537 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 DENND6AQ8IWF6 608 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 FITM2Q8N6M3 262 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 ACVR1CQ8NER5 493 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 DTD2Q96FN9 168 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 NSMCE3Q96MG7 304 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 KCNK13Q9HB14 408 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 THAP1Q9NVV9 213 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 GPR83Q9NYM4 423 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 TBC1D29Q9UFV1 150 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 CORO1CQ9ULV4 474 aaPredicted RBP12.45□□□□□ -0.42
SCAF1-202ENST00000595242 CHKBQ9Y259 395 aa12.45□□□□□ -0.42
SCAF1-202ENST00000595242 GOLGA8TH3BQL2 631 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 TOX3O15405 576 aaPredicted RBP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 ZG16O60844 167 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 DNAJC6O75061 913 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 H2AFYO75367 372 aaKnown RBP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 TIAF1O95411 115 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 PRLP01236 227 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 SLC35E2BP0CK96 405 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 NEFHP12036 1026 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 OGNP20774 298 aaKnown RBP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 LPOP22079 712 aaPredicted RBP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 TEAD1P28347 426 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 ZNF140P52738 457 aaPredicted RBP12.44□□□□□ -0.42
SCAF1-202ENST00000595242 PRKAA2P54646 552 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 RAB10P61026 200 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 MPP1Q00013 466 aa12.44□□□□□ -0.42
SCAF1-202ENST00000595242 STX3Q13277 289 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms