RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-238ENST00000592412 HDAC10Q969S8 669 aa17.46■□□□□ 0.39
CIRBP-238ENST00000592412 SLC22A18Q96BI1 424 aa17.46■□□□□ 0.39
CIRBP-238ENST00000592412 LRRC45Q96CN5 670 aa17.46■□□□□ 0.39
CIRBP-238ENST00000592412 CRB3Q9BUF7 120 aa17.46■□□□□ 0.39
CIRBP-238ENST00000592412 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-238ENST00000592412 STOX2Q9P2F5 926 aaPredicted RBP17.46■□□□□ 0.39
CIRBP-238ENST00000592412 COPG2Q9UBF2 871 aa17.46■□□□□ 0.39
CIRBP-238ENST00000592412 R3HDM2Q9Y2K5 976 aaKnown RBP17.46■□□□□ 0.39
CIRBP-238ENST00000592412 MYO7BQ6PIF6 2116 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 TJP3O95049 919 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 VSX2P58304 361 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-238ENST00000592412 ACVR1Q04771 509 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 SF1Q15637 639 aaKnown RBP17.45■□□□□ 0.38
CIRBP-238ENST00000592412 CCSMST1Q4G0I0 132 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 WASHC2DQ5SRD0 308 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 UNC5DQ6UXZ4 953 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 NLRP9Q7RTR0 991 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 PRSS58Q8IYP2 241 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 TTC29Q8NA56 475 aaPredicted RBP17.45■□□□□ 0.38
CIRBP-238ENST00000592412 SYNPO2LQ9H987 977 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 PLA2G3Q9NZ20 509 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 KLK4Q9Y5K2 254 aa17.45■□□□□ 0.38
CIRBP-238ENST00000592412 IGLV3-12A0A075B6K2 115 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 LOC105369274A0A096LPK9 316 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 LOC102723532A0A0G2JNH3 316 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 ZGLP1P0C6A0 271 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 PRR35P0CG20 571 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 COX6A1P12074 109 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 ACPPP15309 386 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 AOAHP28039 575 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 TNFSF10P50591 281 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 YBX1P67809 324 aaKnown RBP17.44■□□□□ 0.38
CIRBP-238ENST00000592412 SRSF11Q05519 484 aaKnown RBP17.44■□□□□ 0.38
CIRBP-238ENST00000592412 KLF1Q13351 362 aaPredicted RBP17.44■□□□□ 0.38
CIRBP-238ENST00000592412 LAPTM4BQ86VI4 370 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 OR4N4Q8N0Y3 316 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 KRT222Q8N1A0 295 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 LRRC57Q8N9N7 239 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 BRIX1Q8TDN6 353 aaKnown RBP17.44■□□□□ 0.38
CIRBP-238ENST00000592412 NR4A3Q92570 626 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 C10orf90Q96M02 699 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 ALS2CR12Q96Q35 445 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 TMEM121Q9BTD3 319 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 CARD6Q9BX69 1037 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 ZNF304Q9HCX3 659 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 INTS7Q9NVH2 962 aaKnown RBP17.44■□□□□ 0.38
CIRBP-238ENST00000592412 IL1RAPL1Q9NZN1 696 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 C3orf18Q9UK00 162 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 PKDREJQ9NTG1 2253 aa17.44■□□□□ 0.38
CIRBP-238ENST00000592412 A0A1W2PPV9 198 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 A0A1W2PQ72 361 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 HYKKA2RU49 373 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 TARM1B6A8C7 271 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 SRPX2O60687 465 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-238ENST00000592412 SLCO2B1O94956 709 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 CELA2AP08217 269 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 GRIA1P42261 906 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 CARSP49589 748 aaKnown RBP17.43■□□□□ 0.38
CIRBP-238ENST00000592412 ART3Q13508 389 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 NAA30Q147X3 362 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-238ENST00000592412 FAM214AQ32MH5 1076 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 P3H1Q32P28 736 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 VWA2Q5GFL6 755 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 TSTD2Q5T7W7 516 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 AFTPHQ6ULP2 937 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 RNF44Q7L0R7 432 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 LDB1Q86U70 411 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-238ENST00000592412 OR4L1Q8NH43 312 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 SLC35B2Q8TB61 432 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 ASZ1Q8WWH4 475 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 ZUFSPQ96AP4 578 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 MIEF2Q96C03 454 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 MOCOSQ96EN8 888 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 MAGEB10Q96LZ2 347 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-238ENST00000592412 PTGFRNQ9P2B2 879 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 RUVBL2Q9Y230 463 aaKnown RBP17.43■□□□□ 0.38
CIRBP-238ENST00000592412 REXO2Q9Y3B8 237 aaKnown RBP17.43■□□□□ 0.38
CIRBP-238ENST00000592412 KLF2Q9Y5W3 355 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-238ENST00000592412 NFS1Q9Y697 457 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 CPAMD8Q8IZJ3 1885 aa17.43■□□□□ 0.38
CIRBP-238ENST00000592412 A0A0J9YVX5 310 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 TCRBV7S2A1N4TA0A589 114 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 MAP2K7O14733 419 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 ZNF189O75820 626 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-238ENST00000592412 WISP2O76076 250 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 RPN2P04844 631 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 MST1P26927 711 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 BDKRB1P46663 353 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 EFNA3P52797 238 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 ARG2P78540 354 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 CDH17Q12864 832 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 KBTBD2Q8IY47 623 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 CCDC170Q8IYT3 715 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 SIRT6Q8N6T7 355 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 OR2L3Q8NG85 312 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 OR2A1Q8NGT9 310 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 HAS2Q92819 552 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 CCDC120Q96HB5 630 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 MIPEPQ99797 713 aa17.42■□□□□ 0.38
CIRBP-238ENST00000592412 MARCH4Q9P2E8 410 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms