RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FKBP9O95302 570 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 C9P02748 559 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 SBK3P0C264 359 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
VMP1-210ENST00000589823 CPA3P15088 417 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 UGT2B7P16662 529 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 CDH3P22223 829 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 CMPK1P30085 196 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 PEBP1P30086 187 aaKnown RBP13.15□□□□□ -0.3
VMP1-210ENST00000589823 GGT5P36269 586 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 INSM1Q01101 510 aaPredicted RBP13.15□□□□□ -0.3
VMP1-210ENST00000589823 CFHR1Q03591 330 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 GPS2Q13227 327 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 SETDB1Q15047 1291 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 SLC5A12Q1EHB4 618 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 C18orf21Q32NC0 220 aaPredicted RBP13.15□□□□□ -0.3
VMP1-210ENST00000589823 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 TTMPQ5BVD1 217 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 FBXO48Q5FWF7 155 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 SNAP47Q5SQN1 464 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 ZYG11AQ6WRX3 759 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 FAM92BQ6ZTR7 304 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 THOC6Q86W42 341 aaKnown RBP13.15□□□□□ -0.3
VMP1-210ENST00000589823 SLC22A9Q8IVM8 553 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 KLHDC8AQ8IYD2 350 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 LRRC56Q8IYG6 542 aaPredicted RBP13.15□□□□□ -0.3
VMP1-210ENST00000589823 CARFQ8N187 725 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 TMEM151AQ8N4L1 468 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 PTGR2Q8N8N7 351 aaPredicted RBP13.15□□□□□ -0.3
VMP1-210ENST00000589823 ARMC2Q8NEN0 867 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 CCDC126Q96EE4 140 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 TMEM74Q96NL1 305 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 FAM111AQ96PZ2 611 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 OR2A14Q96R47 310 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 TMEM79Q9BSE2 394 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 HAUS8Q9BT25 410 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 SGPP1Q9BX95 441 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 CD244Q9BZW8 370 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 TWSG1Q9GZX9 223 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 C12orf65Q9H3J6 166 aaKnown RBP13.15□□□□□ -0.3
VMP1-210ENST00000589823 C1GALT1Q9NS00 363 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 TMEM9Q9P0T7 183 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 SLC17A7Q9P2U7 560 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 OPTCQ9UBM4 332 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 TAC3Q9UHF0 121 aa13.15□□□□□ -0.3
VMP1-210ENST00000589823 A0A0J9YY10 115 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 TLCD2A6NGC4 264 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 STX16-NPEPL1H3BU86 382 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 K7EPI3 171 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 STX16O14662 325 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 PRICKLE3O43900 615 aaPredicted RBP13.14□□□□□ -0.31
VMP1-210ENST00000589823 DKK1O94907 266 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 ZWINTO95229 277 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 MT-CO3P00414 261 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 MPSTP25325 297 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 PSMB5P28074 263 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 EEF1DP29692 281 aaKnown RBP13.14□□□□□ -0.31
VMP1-210ENST00000589823 GDF5P43026 501 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 SLC6A12P48065 614 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 INHBCP55103 352 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 PPP1CAP62136 330 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 ABATP80404 500 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 NFKB2Q00653 900 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 TRA2AQ13595 282 aaKnown RBP eCLIP13.14□□□□□ -0.31
VMP1-210ENST00000589823 PUM1Q14671 1186 aaKnown RBP eCLIP13.14□□□□□ -0.31
VMP1-210ENST00000589823 NAA25Q14CX7 972 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 PHF19Q5T6S3 580 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 CACHD1Q5VU97 1274 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 ICE2Q659A1 982 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 LCTLQ6UWM7 567 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 LRRC70Q7Z2Q7 622 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 TRIM73Q86UV7 250 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 C17orf64Q86WR6 236 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 SNX31Q8N9S9 440 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 OR2A1Q8NGT9 310 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 UBTD2Q8WUN7 234 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 SREK1Q8WXA9 508 aaKnown RBP13.14□□□□□ -0.31
VMP1-210ENST00000589823 DEPDC7Q96QD5 511 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 MAP3K3Q99759 626 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 SELENOSQ9BQE4 189 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 CAPS2Q9BXY5 557 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 MRPS30Q9NP92 439 aaKnown RBP13.14□□□□□ -0.31
VMP1-210ENST00000589823 DNAJC11Q9NVH1 559 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
VMP1-210ENST00000589823 COPG2Q9UBF2 871 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 SLC22A14Q9Y267 594 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 ANGPTL3Q9Y5C1 460 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 KCNE2Q9Y6J6 123 aa13.14□□□□□ -0.31
VMP1-210ENST00000589823 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
VMP1-210ENST00000589823 RP1P56715 2156 aa13.13□□□□□ -0.31
VMP1-210ENST00000589823 IGHV5-10-1A0A0J9YXX1 117 aa13.13□□□□□ -0.31
VMP1-210ENST00000589823 TMEM120BA0PK00 339 aa13.13□□□□□ -0.31
VMP1-210ENST00000589823 A8MU76 341 aa13.13□□□□□ -0.31
VMP1-210ENST00000589823 G3V2L1 256 aa13.13□□□□□ -0.31
VMP1-210ENST00000589823 TMX2-CTNND1H3BSU7 103 aa13.13□□□□□ -0.31
VMP1-210ENST00000589823 TOX3O15405 576 aaPredicted RBP13.13□□□□□ -0.31
VMP1-210ENST00000589823 MAP3K7O43318 606 aa13.13□□□□□ -0.31
VMP1-210ENST00000589823 DLX3O60479 287 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms