RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 NXT1Q9UKK6 140 aaKnown RBP11.71□□□□□ -0.53
VAT1-206ENST00000589709 NFS1Q9Y697 457 aa11.71□□□□□ -0.53
VAT1-206ENST00000589709 TCRBV7S3A2A0A539 114 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 MAGEB16A2A368 324 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 CTSVO60911 334 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 FMO4P31512 558 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 AIMP2Q13155 320 aaKnown RBP11.7□□□□□ -0.54
VAT1-206ENST00000589709 RAPSNQ13702 412 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 KCNJ11Q14654 390 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 ESPL1Q14674 2120 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 NAA25Q14CX7 972 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 CCSMST1Q4G0I0 132 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 WASHC2DQ5SRD0 308 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 CES3Q6UWW8 571 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 TAX1BP1Q86VP1 789 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 OTUD6BQ8N6M0 293 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 TTC29Q8NA56 475 aaPredicted RBP11.7□□□□□ -0.54
VAT1-206ENST00000589709 SKA2Q8WVK7 121 aaPredicted RBP11.7□□□□□ -0.54
VAT1-206ENST00000589709 TM9SF4Q92544 642 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 SPSB2Q99619 263 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 SLC29A3Q9BZD2 475 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 KLHL42Q9P2K6 505 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 B3GNT3Q9Y2A9 372 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
VAT1-206ENST00000589709 SPTBN1Q01082 2364 aaKnown RBP11.7□□□□□ -0.54
VAT1-206ENST00000589709 SHANK1Q9Y566 2161 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 CCDC88CQ9P219 2028 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 SPENQ96T58 3664 aaKnown RBP11.69□□□□□ -0.54
VAT1-206ENST00000589709 A0A1W2PPV9 198 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 HYKKA2RU49 373 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 BLACEA4D250 179 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 VSTM2BA6NLU5 285 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 TCP11X1B4DZS4 312 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 GOLGA8KD6RF30 607 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 GOLGA8TH3BQL2 631 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 NIPSNAP2O75323 286 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 ERGP11308 486 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 MLNP12872 115 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 PKMP14618 531 aaKnown RBP11.69□□□□□ -0.54
VAT1-206ENST00000589709 PAMP19021 973 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 MCM3P25205 808 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 HSD17B2P37059 387 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 BDKRB1P46663 353 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 EMP3P54852 163 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 FOXL2P58012 376 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 ARHGAP19Q14CB8 494 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 ANKRD20A4Q4UJ75 823 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 PRR30Q53SZ7 412 aaPredicted RBP11.69□□□□□ -0.54
VAT1-206ENST00000589709 NEPROQ6NW34 567 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 PRMT9Q6P2P2 845 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 CNSTQ6PJW8 725 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 Q6ZS92 163 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 CENPUQ71F23 418 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 COX15Q7KZN9 410 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 RNF44Q7L0R7 432 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 CAND1Q86VP6 1230 aaKnown RBP11.69□□□□□ -0.54
VAT1-206ENST00000589709 TMEM151BQ8IW70 566 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 LRRC8AQ8IWT6 810 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 IQCKQ8N0W5 287 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 MCUQ8NE86 351 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 OR9A1PQ8NGU1 263 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 VPS50Q96JG6 964 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 MIPEPQ99797 713 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 LRRC4CQ9HCJ2 640 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 CUEDC1Q9NWM3 386 aaPredicted RBP11.69□□□□□ -0.54
VAT1-206ENST00000589709 LUZP4Q9P127 313 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 RUVBL2Q9Y230 463 aaKnown RBP11.69□□□□□ -0.54
VAT1-206ENST00000589709 CRYL1Q9Y2S2 319 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 FAM169AQ9Y6X4 670 aa11.69□□□□□ -0.54
VAT1-206ENST00000589709 FAM237BA0A1B0GVD1 139 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 OR2A25A4D2G3 310 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 SDR42E2A6NKP2 422 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 MYO1CO00159 1063 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 SOCS6O14544 535 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 PHF2O75151 1096 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 AVILO75366 819 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 PSIP1O75475 530 aaKnown RBP11.68□□□□□ -0.54
VAT1-206ENST00000589709 AGFG2O95081 481 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 CHRM3P20309 590 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 PSMB5P28074 263 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 CMPK1P30085 196 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 CXCR5P32302 372 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 VSX2P58304 361 aaPredicted RBP11.68□□□□□ -0.54
VAT1-206ENST00000589709 GPS1Q13098 491 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 ACSBG2Q5FVE4 666 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 CRB2Q5IJ48 1285 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 PRAMEF13Q5VWM6 474 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 FBXO42Q6P3S6 717 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 KIRREL2Q6UWL6 708 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 NEK10Q6ZWH5 1172 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 CILP2Q8IUL8 1156 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 RASGEF1CQ8N431 466 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 ZADH2Q8N4Q0 377 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.68□□□□□ -0.54
VAT1-206ENST00000589709 SMPDL3AQ92484 453 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 SNRNP40Q96DI7 357 aaKnown RBP11.68□□□□□ -0.54
VAT1-206ENST00000589709 BARD1Q99728 777 aaKnown RBP11.68□□□□□ -0.54
VAT1-206ENST00000589709 XAB2Q9HCS7 855 aaKnown RBP11.68□□□□□ -0.54
VAT1-206ENST00000589709 SLC6A20Q9NP91 592 aa11.68□□□□□ -0.54
VAT1-206ENST00000589709 FAM114A2Q9NRY5 505 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms