RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 VSX2P58304 361 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-213ENST00000587604 MFAP5Q13361 173 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 FASTKD1Q53R41 847 aaKnown RBP13.44□□□□□ -0.26
DNMT1-213ENST00000587604 WASHC2DQ5SRD0 308 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 TTC23LQ6PF05 361 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 FAM180AQ6UWF9 173 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 LINC00696Q6ZRV3 163 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 ZNF534Q76KX8 674 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 NLRP9Q7RTR0 991 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 TAX1BP1Q86VP1 789 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 METTL27Q8N6F8 245 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-213ENST00000587604 UBL4BQ8N7F7 174 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 CATSPER1Q8NEC5 780 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 RAD51AP1Q96B01 352 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 SLX1AQ9BQ83 275 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 CRB3Q9BUF7 120 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 RAB11FIP5Q9BXF6 653 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 LACRTQ9GZZ8 138 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 ZNF304Q9HCX3 659 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 AMFRQ9UKV5 643 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 R3HDM2Q9Y2K5 976 aaKnown RBP13.44□□□□□ -0.26
DNMT1-213ENST00000587604 KLK4Q9Y5K2 254 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 MAU2Q9Y6X3 613 aa13.44□□□□□ -0.26
DNMT1-213ENST00000587604 SOWAHDA6NJG2 315 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 ZG16O60844 167 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 CTSVO60911 334 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 KLHL18O94889 574 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 PRAMEP78395 509 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 OCA2Q04671 838 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 KLC1Q07866 573 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 SEMA3AQ14563 771 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 TMED2Q15363 201 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 AARS2Q5JTZ9 985 aaKnown RBP13.43□□□□□ -0.26
DNMT1-213ENST00000587604 ATG9BQ674R7 924 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 SP5Q6BEB4 398 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-213ENST00000587604 PRMT9Q6P2P2 845 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 PPP1R21Q6ZMI0 780 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 PEX26Q7Z412 305 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 BCORP1Q8N888 145 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 STT3BQ8TCJ2 826 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 LKAAEAR1Q8TD35 194 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 PEX13Q92968 403 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 MARVELD3Q96A59 401 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 MIEF2Q96C03 454 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 MRFAP1L1Q96HT8 127 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 ZNF778Q96MU6 729 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 PANX2Q96RD6 677 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 TRIM56Q9BRZ2 755 aaKnown RBP13.43□□□□□ -0.26
DNMT1-213ENST00000587604 ETNK1Q9HBU6 452 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 OLAHQ9NV23 265 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 ZNF282Q9UDV7 671 aaPredicted RBP13.43□□□□□ -0.26
DNMT1-213ENST00000587604 REXO2Q9Y3B8 237 aaKnown RBP13.43□□□□□ -0.26
DNMT1-213ENST00000587604 MRFAP1Q9Y605 127 aa13.43□□□□□ -0.26
DNMT1-213ENST00000587604 MIF4GDA9UHW6 222 aaKnown RBP13.42□□□□□ -0.26
DNMT1-213ENST00000587604 PRMT5O14744 637 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-213ENST00000587604 JRKO75564 520 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 MED26O95402 600 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 ZGLP1P0C6A0 271 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 ACPPP15309 386 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 FDFT1P37268 417 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 GRIA1P42261 906 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 ZNF324BQ6AW86 544 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-213ENST00000587604 FRMPD2BQ6IN97 320 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 KBTBD2Q8IY47 623 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 KRT222Q8N1A0 295 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 RAB42Q8N4Z0 105 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 DTWD1Q8N5C7 304 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 OR1N1Q8NGS0 311 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 GSDMBQ8TAX9 411 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 HMGCLL1Q8TB92 370 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 PANX3Q96QZ0 392 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 MESP1Q9BRJ9 268 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 ZNF160Q9HCG1 818 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 ZC3H7BQ9UGR2 993 aaKnown RBP13.42□□□□□ -0.26
DNMT1-213ENST00000587604 ANAPC5Q9UJX4 755 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 TTC7AQ9ULT0 858 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-213ENST00000587604 FAM169AQ9Y6X4 670 aa13.42□□□□□ -0.26
DNMT1-213ENST00000587604 IGLV3-12A0A075B6K2 115 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 LOC105369274A0A096LPK9 316 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 LOC102723532A0A0G2JNH3 316 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 A0A0J9YVX5 310 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 TCRBV7S2A1N4TA0A589 114 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 ARHGAP10A1A4S6 786 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 DYTNA2CJ06 578 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 MAP2K7O14733 419 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 KPNA5O15131 536 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 USP1O94782 785 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 C1orf105O95561 183 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 PRF1P14222 555 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 ELAVL4P26378 380 aaKnown RBP13.41□□□□□ -0.26
DNMT1-213ENST00000587604 TTPAP49638 278 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 ARG2P78540 354 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 PTRHD1Q6GMV3 140 aaKnown RBP13.41□□□□□ -0.26
DNMT1-213ENST00000587604 NDUFAF7Q7L592 441 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 LDB1Q86U70 411 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-213ENST00000587604 FJX1Q86VR8 437 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 SYCE1Q8N0S2 351 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 OR4N4Q8N0Y3 316 aa13.41□□□□□ -0.26
DNMT1-213ENST00000587604 OR2L3Q8NG85 312 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms