RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 RASAL1O95294 804 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 CLDN14O95500 239 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 HPP00738 406 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 CRYABP02511 175 aaKnown RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 CHRM5P08912 532 aaPredicted RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 RALBP11234 206 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 PIM1P11309 404 aaPredicted RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 ZFXP17010 805 aaPredicted RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 AGAP20933 346 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 PTPN7P35236 360 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 COILP38432 576 aaPredicted RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 ATP5OP48047 213 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 PRLHRP49683 370 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 ART1P52961 327 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 EIF3EP60228 445 aaKnown RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 DR1Q01658 176 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 PTPRCAPQ14761 206 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 PPP1R7Q15435 360 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 SIX1Q15475 284 aaPredicted RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 C3AR1Q16581 482 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 CCNG2Q16589 344 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 TAZQ16635 292 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 KCTD19Q17RG1 926 aaPredicted RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 BBS12Q6ZW61 710 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 MAATS1Q7Z4T9 603 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 FAM20CQ8IXL6 584 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 PRSS58Q8IYP2 241 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 SIRT6Q8N6T7 355 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 ACTL9Q8TC94 416 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 MAGED4Q96JG8 741 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 LINC00615Q96LM1 132 aaPredicted RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 RUNDC3BQ96NL0 473 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 CRB3Q9BUF7 120 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.2□□□□□ -1.14e-6■□□□□ 8.7
SDF2-204ENST00000587338 OR52A5Q9H2C5 316 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 ASB8Q9H765 288 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 COG4Q9H9E3 785 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 SEMA3GQ9NS98 782 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 SPHK1Q9NYA1 384 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 FAM153AQ9UHL3 310 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 NXT1Q9UKK6 140 aaKnown RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 PLCL2Q9UPR0 1127 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 ZNF148Q9UQR1 794 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 EFR3BQ9Y2G0 817 aa8.2□□□□□ -1.1
SDF2-204ENST00000587338 R3HDM2Q9Y2K5 976 aaKnown RBP8.2□□□□□ -1.1
SDF2-204ENST00000587338 ABCA4P78363 2273 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 NCOA6Q14686 2063 aaPredicted RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 C17orf113A0A1B0GUU1 675 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 LOC285095A0A1B0GVY8 99 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 CFAP99D6REC4 459 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 TTI1O43156 1089 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 RAD51CO43502 376 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 LIASO43766 372 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 SRP72O76094 671 aaKnown RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 ALBP02768 609 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 CD99P14209 185 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 ACPPP15309 386 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 PECAM1P16284 738 aaPredicted RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 NFKB1P19838 968 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 PDHA2P29803 388 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 SHMT2P34897 504 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 TERF1P54274 439 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 ARSFP54793 590 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 KLF1Q13351 362 aaPredicted RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 BOP1Q14137 746 aaKnown RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 TRIP13Q15645 432 aaPredicted RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 SLC1A5Q15758 541 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 CYP1B1Q16678 543 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 SLC5A12Q1EHB4 618 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 TEX44Q53QW1 395 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 ZNF449Q6P9G9 518 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 DARS2Q6PI48 645 aaKnown RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 KDELC1Q6UW63 502 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 MEX3BQ6ZN04 569 aaKnown RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 UNC5AQ6ZN44 842 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 COX15Q7KZN9 410 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 KBTBD2Q8IY47 623 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 DNAJC22Q8N4W6 341 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 METTL27Q8N6F8 245 aaPredicted RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 IPMKQ8NFU5 416 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 OR5AR1Q8NGP9 310 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 BRIX1Q8TDN6 353 aaKnown RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 GRK7Q8WTQ7 553 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 TFGQ92734 400 aaPredicted RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 C8orf44Q96CB5 159 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 TRIM31Q9BZY9 425 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 CHRNA10Q9GZZ6 450 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 SLC26A1Q9H2B4 701 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 EURLQ9NYK6 297 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 FEZ2Q9UHY8 353 aaPredicted RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 FKBPLQ9UIM3 349 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 CRLS1Q9UJA2 301 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 KLHL20Q9Y2M5 609 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 TDRKHQ9Y2W6 561 aaKnown RBP8.19□□□□□ -1.1
SDF2-204ENST00000587338 ARL5AQ9Y689 179 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 AKAP6Q13023 2319 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 JMJD1CQ15652 2540 aa8.19□□□□□ -1.1
SDF2-204ENST00000587338 NSG1A0A0A6YYJ2 146 aa8.18□□□□□ -1.1
SDF2-204ENST00000587338 ISM1B1AKI9 464 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms