RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	HPS6	Q86YV9	775 aa		12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	ZNF655	Q8N720	491 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	TMEM102	Q8N9M5	508 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	OR2L3	Q8NG85	312 aa		12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	FKBP10	Q96AY3	582 aa		12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	IL17F	Q96PD4	163 aa		12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	TRIM56	Q9BRZ2	755 aa	Known RBP	12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	AARSD1	Q9BTE6	412 aa	Known RBP	12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	SPRTN	Q9H040	489 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	FBXO6	Q9NRD1	293 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	TAS2R13	Q9NYV9	303 aa		12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	GPN3	Q9UHW5	284 aa	Predicted RBP	12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	G3BP2	Q9UN86	482 aa	Known RBP	12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708	MED16	Q9Y2X0	877 aa		12.09	□□□□□ -0.47
CDK5RAP3-222	ENST00000581708		A0A1B0GX78	115 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ZBTB14	O43829	449 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	KLF7	O75840	302 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	HRH2	P25021	359 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CASR	P41180	1078 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	BDKRB1	P46663	353 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	RGS4	P49798	205 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	RPS18	P62269	152 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ABAT	P80404	500 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	DHX9	Q08211	1270 aa	Known RBP	12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	IL10RA	Q13651	578 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	DEFB110	Q30KQ9	67 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PTCHD3	Q3KNS1	767 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FCRL6	Q6DN72	434 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	LCN10	Q6JVE6	187 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PRICKLE2	Q7Z3G6	844 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TTC29	Q8NA56	475 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	BBOF1	Q8ND07	529 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	OR2Y1	Q8NGV0	311 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CD200R1	Q8TD46	325 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CERS2	Q96G23	380 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	RUFY1	Q96T51	708 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SELENOS	Q9BQE4	189 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SLC26A1	Q9H2B4	701 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	WDR54	Q9H977	334 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MLXIPL	Q9NP71	852 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	IRAK4	Q9NWZ3	460 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	IFT80	Q9P2H3	777 aa	Predicted RBP	12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	NDOR1	Q9UHB4	597 aa		12.08	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708		A0A1W2PPV9	198 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	OR2A25	A4D2G3	310 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	DSCR3	O14972	297 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SLC16A5	O15375	505 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	HCRTR1	O43613	425 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CEACAM4	O75871	244 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	HAUS5	O94927	633 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SEC31A	O94979	1220 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	C8G	P07360	202 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	RPA3	P35244	121 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CSRP3	P50461	194 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PNLIPRP1	P54315	467 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ARL4C	P56559	192 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PRDX1	Q06830	199 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	KLRB1	Q12918	225 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SP140	Q13342	867 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	HIF1A	Q16665	826 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	BBS9	Q3SYG4	887 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CCSMST1	Q4G0I0	132 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	HIBCH	Q6NVY1	386 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MRPL14	Q6P1L8	145 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CYHR1	Q6ZMK1	362 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	RNF44	Q7L0R7	432 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	KLHL7	Q8IXQ5	586 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	C2orf73	Q8N5S3	287 aa	Predicted RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	GIMAP7	Q8NHV1	300 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PTER	Q96BW5	349 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FAM136A	Q96C01	138 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	RNF31	Q96EP0	1072 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SNF8	Q96H20	258 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	CAPZA3	Q96KX2	299 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	GPR21	Q99679	349 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ZFYVE21	Q9BQ24	234 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PCBD2	Q9H0N5	130 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ING2	Q9H160	280 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ACSS2	Q9NR19	701 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	IARS2	Q9NSE4	1012 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	GALP	Q9UBC7	116 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TRMT6	Q9UJA5	497 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TLK1	Q9UKI8	766 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	NXT1	Q9UKK6	140 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	RUVBL2	Q9Y230	463 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TEX264	Q9Y6I9	313 aa		12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ASH1L	Q9NR48	2969 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FLNB	O75369	2602 aa	Known RBP	12.07	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	PCM1	Q15154	2024 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FLNC	Q14315	2725 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708		E7ENX8	843 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TXNDC9	O14530	226 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	SLC16A8	O95907	504 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	ERVK-10	P10266	1014 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	FOLR3	P41439	243 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	TAP2	Q03519	686 aa		12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	KCTD19	Q17RG1	926 aa	Predicted RBP	12.06	□□□□□ -0.48
CDK5RAP3-222	ENST00000581708	MSS51	Q4VC12	460 aa		12.06	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms