RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 GOLPH3LQ9H4A5 285 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 FAM207AQ9NSI2 230 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 MRPL15Q9P015 296 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 STUB1Q9UNE7 303 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 PPP1R3CQ9UQK1 317 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 TMEM5Q9Y2B1 443 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 PADI2Q9Y2J8 665 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 TMED3Q9Y3Q3 217 aa2.77□□□□□ -1.97
SMCHD1-206ENST00000581631 HCFC1P51610 2035 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 IGLV3-10A0A075B6K4 115 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 IPO8O15397 1037 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 GFPT2O94808 682 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 ZSCAN5DPP0CG00 497 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 UGT1A4P22310 534 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 HNF4AP41235 474 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 LEPRP48357 1165 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 LBX1P52954 281 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 EIF5P55010 431 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 PAX9P55771 341 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 HNRNPKP61978 463 aaKnown RBP eCLIP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 MAT1AQ00266 395 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 RAPSNQ13702 412 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 NECTIN1Q15223 517 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 SNAPC1Q16533 368 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 CA9Q16790 459 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 HYIQ5T013 277 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 OR10S1Q8NGN2 331 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 OR13C3Q8NGS6 347 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 CFAP61Q8NHU2 1237 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 SYN2Q92777 582 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 SLAMF9Q96A28 289 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 THOC1Q96FV9 657 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 NECTIN4Q96NY8 510 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 ABHD1Q96SE0 405 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 LRRC61Q9BV99 259 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 RAB11FIP5Q9BXF6 653 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 TRIM6Q9C030 488 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 UPF3AQ9H1J1 476 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 PPANQ9NQ55 473 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 PANK4Q9NVE7 773 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 OR6C2Q9NZP2 312 aa2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 CRNNQ9UBG3 495 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 FBXO2Q9UK22 296 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-206ENST00000581631 IGHV3OR16-10A0A075B7F0 116 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 GLOD5A6NK44 160 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 C2orf81A6NN90 581 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 EPHB6O15197 1021 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 BEST1O76090 585 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 SEC24AO95486 1093 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 DANCRP0C864 163 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 HAPLN1P10915 354 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 PFKFB1P16118 471 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 CYP2A7P20853 494 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 MPZP25189 248 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 CSTF2P33240 577 aaKnown RBP eCLIP2.75□□□□□ -1.972e-8■■■■■ 34.9
SMCHD1-206ENST00000581631 BAATQ14032 418 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 UGT3A2Q3SY77 523 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 CBWD6Q4V339 395 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 CBWD3Q5JTY5 395 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 WLSQ5T9L3 541 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 C11orf63Q6NUN7 778 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 SLC25A47Q6Q0C1 308 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 NUDT13Q86X67 352 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 DNAAF5Q86Y56 855 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 OR10G8Q8NGN5 311 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 ZNF519Q8TB69 540 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 PIGBQ92521 554 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 ZNF486Q96H40 463 aaPredicted RBP2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 C10orf90Q96M02 699 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 NSMCE3Q96MG7 304 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 FAM20AQ96MK3 541 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 USP28Q96RU2 1077 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 KRT12Q99456 494 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 THAP2Q9H0W7 228 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 SPHK2Q9NRA0 654 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 MAN2C1Q9NTJ4 1040 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 STK26Q9P289 416 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 PPIEQ9UNP9 301 aaKnown RBP2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 MOB4Q9Y3A3 225 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 TRIM17Q9Y577 477 aa2.75□□□□□ -1.97
SMCHD1-206ENST00000581631 C15orf61A6NNL5 157 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 KPNA7A9QM74 516 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 SOCS3O14543 225 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 AHCYL1O43865 530 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 GLRA3O75311 464 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 PGM3O95394 542 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 LHCGRP22888 699 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 MAPK12P53778 367 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 HSPB3Q12988 150 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 TNIP1Q15025 636 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 PDLIM3Q53GG5 364 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 TAF1BQ53T94 588 aaPredicted RBP2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 SLC35D3Q5M8T2 416 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 LCN1P1Q5VSP4 162 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 MZT2BQ6NZ67 158 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 NUP54Q7Z3B4 507 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 ADGRA1Q86SQ6 560 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 MMD2Q8IY49 270 aa2.74□□□□□ -1.97
SMCHD1-206ENST00000581631 SLC39A11Q8N1S5 342 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms