RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 IFT52Q9Y366 437 aa3.92□□□□□ -1.78
SMG8-205ENST00000580798 PTRH2Q9Y3E5 179 aaKnown RBP3.92□□□□□ -1.78
SMG8-205ENST00000580798 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.92□□□□□ -1.78
SMG8-205ENST00000580798 MAU2Q9Y6X3 613 aa3.92□□□□□ -1.78
SMG8-205ENST00000580798 ANKRD30AQ9BXX3 1397 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 UQCRHLA0A096LP55 91 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 C2orf92A0A1B0GVN3 265 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 BTBD17A6NE02 478 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 IQCF5A8MTL0 148 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 EFCAB8A8MWE9 144 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 FHAD1B1AJZ9 1412 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 KBTBD13C9JR72 458 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 SLCO1B7G3V0H7 640 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 ZNF701M0R085 212 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 PEX12O00623 359 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 STX16O14662 325 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 AIM2O14862 343 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 PCDH17O14917 1159 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 KCNN4O15554 427 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 CALUO43852 315 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 DDNO94850 711 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 UFL1O94874 794 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 RPP14O95059 124 aaKnown RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 CCNB2O95067 398 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 PGLSO95336 258 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 AHSA1O95433 338 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 LCA5LO95447 670 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 C22orf31O95567 290 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 DDAH2O95865 285 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 ASS1P00966 412 aaKnown RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 TFRCP02786 760 aaKnown RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 CRYGCP07315 174 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 UQCRHP07919 91 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 PNMA6AP0CW24 399 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 HSMCR30P0CW71 290 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 RAB4AP20338 218 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 ITGB8P26012 769 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 POU1F1P28069 291 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 HOXD9P28356 352 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 PTPN6P29350 595 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 YWHABP31946 246 aaKnown RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 GPD2P43304 727 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 LEPRP48357 1165 aaKnown RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 RGS7P49802 495 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 ARHGDIAP52565 204 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 CEBPGP53567 150 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 PNLIPRP1P54315 467 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 MFAP4P55083 255 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 YWHAGP61981 247 aaKnown RBP eCLIP3.91□□□□□ -1.78
SMG8-205ENST00000580798 PTP4A2Q12974 167 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 STX5Q13190 355 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 BAATQ14032 418 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 IRF3Q14653 427 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 CEBPEQ15744 281 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 NDUFA5Q16718 116 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 SYT16Q17RD7 645 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 BCL7AQ4VC05 210 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 PLA1AQ53H76 456 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 TAF1BQ53T94 588 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 AWAT1Q58HT5 328 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 BEND6Q5SZJ8 279 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 GCNT6Q5T4J0 391 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 LIPMQ5VYY2 423 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 CLEC6AQ6EIG7 209 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 NEPROQ6NW34 567 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 MOXD1Q6UVY6 613 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 CES3Q6UWW8 571 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 USP50Q70EL3 339 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 ANO5Q75V66 913 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 MTSS1LQ765P7 747 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 DCXRQ7Z4W1 244 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 SLC51BQ86UW2 128 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 NUDCD3Q8IVD9 361 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 UBE2J2Q8N2K1 259 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 TBC1D19Q8N5T2 526 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 SIRT6Q8N6T7 355 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 ASCC1Q8N9N2 400 aaKnown RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 MINDY2Q8NBR6 621 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 C11orf65Q8NCR3 313 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 ZNF397Q8NF99 534 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 OR7G3Q8NG95 312 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 OR10T2Q8NGX3 314 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 DNAJB14Q8TBM8 379 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 SLC20A1Q8WUM9 679 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 RSC1A1Q92681 617 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 MRPL38Q96DV4 380 aaKnown RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 RNFT2Q96EX2 444 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 FYTTD1Q96QD9 318 aaKnown RBP3.91□□□□□ -1.78
SMG8-205ENST00000580798 OR1F2PQ96R84 312 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 INTS14Q96SY0 518 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 CIB1Q99828 191 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 C17orf80Q9BSJ5 609 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 CNPY3Q9BT09 278 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 CHID1Q9BWS9 393 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 BBS2Q9BXC9 721 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 BLZF1Q9H2G9 400 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 LRMDAQ9H2I8 198 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 HIPK2Q9H2X6 1198 aa3.91□□□□□ -1.78
SMG8-205ENST00000580798 TP63Q9H3D4 680 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms