RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 SLC23A3Q6PIS1 610 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 PRR23BQ6ZRT6 265 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 RNF165Q6ZSG1 346 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 SYVN1Q86TM6 617 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 CACNA2D3Q8IZS8 1091 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 NAGSQ8N159 534 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 L3MBTL4Q8NA19 623 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 CCDC197Q8NCU1 140 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 SLC37A2Q8TED4 501 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 LCN9Q8WX39 176 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 SH3KBP1Q96B97 665 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 PYCR2Q96C36 320 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 EHD1Q9H4M9 534 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 RABEP2Q9H5N1 569 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 ACTR8Q9H981 624 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 CAPN10Q9HC96 672 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 MARCOQ9UEW3 520 aaPredicted RBP12.99□□□□□ -0.33
SRSF1-202ENST00000578430 ARL2BPQ9Y2Y0 163 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 FANCMQ8IYD8 2048 aa12.99□□□□□ -0.33
SRSF1-202ENST00000578430 A0A1B0GTQ1 180 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 KRT87PA6NCN2 255 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 PPP6CO00743 305 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 CFIP05156 583 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 SYPP08247 313 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 HGFP14210 728 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 NPPBP16860 134 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 EPORP19235 508 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 ARL1P40616 181 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-202ENST00000578430 HNF4AP41235 474 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 FASLGP48023 281 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 ARFIP2P53365 341 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 AQP5P55064 265 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 INHBCP55103 352 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 ERVPABLB-1P60509 514 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 IRF8Q02556 426 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 ZNF33BQ06732 778 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 GRIK2Q13002 908 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 E2F2Q14209 437 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 TCEA2Q15560 299 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 PRAMEF14Q5SWL7 426 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 THEMIS2Q5TEJ8 643 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 PRAMEF13Q5VWM6 474 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 AMIGO1Q86WK6 493 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 C17orf82Q86X59 251 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-202ENST00000578430 OR4F6Q8NGB9 312 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 OR52B6Q8NGF0 335 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 C10orf82Q8WW14 230 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 SLC22A18Q96BI1 424 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 WDR34Q96EX3 536 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 SEC16BQ96JE7 1060 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 IL17FQ96PD4 163 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 OR4K3Q96R72 315 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.98□□□□□ -0.33
SRSF1-202ENST00000578430 SHCBP1LQ9BZQ2 653 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 TWSG1Q9GZX9 223 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 ZNF225Q9UK10 706 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 PLAGL1Q9UM63 463 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 ICKQ9UPZ9 632 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 FAM186AA6NE01 2351 aa12.98□□□□□ -0.33
SRSF1-202ENST00000578430 CACNA1EQ15878 2313 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 RIF1Q5UIP0 2472 aaKnown RBP12.97□□□□□ -0.33
SRSF1-202ENST00000578430 A0A0G2JND7 137 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 B4DGG1 531 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 ZNF195O14628 629 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 WFS1O76024 890 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 OR4F21O95013 312 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 CCNDBP1O95273 360 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 FKBP9O95302 570 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 CER1O95813 267 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 ALPPL2P10696 532 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 HRH2P25021 359 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 EPHA8P29322 1005 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-202ENST00000578430 HMOX2P30519 316 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 ABATP80404 500 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 HHEXQ03014 270 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 LAPTM5Q13571 262 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 FASTKQ14296 549 aaKnown RBP12.97□□□□□ -0.33
SRSF1-202ENST00000578430 KIR2DS3Q14952 304 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 UGT3A2Q3SY77 523 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-202ENST00000578430 C10orf62Q5T681 223 aaPredicted RBP12.97□□□□□ -0.33
SRSF1-202ENST00000578430 LETMD1Q6P1Q0 360 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 EPGNQ6UW88 154 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 TMEM26Q6ZUK4 368 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 C17orf64Q86WR6 236 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 LINC01555Q8NAE3 123 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 PPFIBP2Q8ND30 876 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 RFWD2Q8NHY2 731 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 METTL6Q8TCB7 284 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 AGR3Q8TD06 166 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 SLC5A11Q8WWX8 675 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 PTCD3Q96EY7 689 aaKnown RBP12.97□□□□□ -0.33
SRSF1-202ENST00000578430 EFCAB11Q9BUY7 163 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 DUSP23Q9BVJ7 150 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 TMEM120AQ9BXJ8 343 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 SRMSQ9H3Y6 488 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 KCNK13Q9HB14 408 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 CIDEBQ9UHD4 219 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 DCTN4Q9UJW0 460 aa12.97□□□□□ -0.33
SRSF1-202ENST00000578430 SNX6Q9UNH7 406 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms