RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 PRR5P85299 388 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ACY1Q03154 408 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 TUBB2AQ13885 445 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 DPYSL3Q14195 570 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 NCF4Q15080 339 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 PAFAH1B3Q15102 231 aaKnown RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ZRSR2Q15696 482 aaKnown RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 DEFB110Q30KQ9 67 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ANKRD20A8PQ5CZ79 823 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 EMC4Q5J8M3 183 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 FKBP15Q5T1M5 1219 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 RNF187Q5TA31 235 aaPredicted RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 VWA5B1Q5TIE3 1220 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 Q6ZS92 163 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 B4GALNT4Q76KP1 1039 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 PPP1R32Q7Z5V6 425 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 KCNMB4Q86W47 210 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 LILRA3Q8N6C8 439 aaPredicted RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 PQLC3Q8N755 202 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 AVL9Q8NBF6 648 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ST6GALNAC3Q8NDV1 305 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 FAM71BQ8TC56 605 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 NSMCE1Q8WV22 266 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ALG3Q92685 438 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 CLIP3Q96DZ5 547 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ZDHHC12Q96GR4 267 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 RMDN2Q96LZ7 410 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 LRFN5Q96NI6 719 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 FCRL4Q96PJ5 515 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ERGIC2Q96RQ1 377 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 MESP1Q9BRJ9 268 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 YIPF4Q9BSR8 244 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ZSCAN5AQ9BUG6 496 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 TUBB2BQ9BVA1 445 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 NLNQ9BYT8 704 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ILKAPQ9H0C8 392 aaPredicted RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 WWP1Q9H0M0 922 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 CDIP1Q9H305 208 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 HAUS4Q9H6D7 363 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 BPIFA1Q9NP55 256 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 KCND1Q9NSA2 647 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 RBM22Q9NW64 420 aaKnown RBP eCLIP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 HRASLS2Q9NWW9 162 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 SOHLH2Q9NX45 425 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 SAMD15Q9P1V8 674 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 POMT2Q9UKY4 750 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 DNPEPQ9ULA0 475 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 ENTPD4Q9Y227 616 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 OSGIN2Q9Y236 505 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 BTRCQ9Y297 605 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 B3GNT3Q9Y2A9 372 aa3.82□□□□□ -1.8
PTPRM-206ENST00000578093 TNPO3Q9Y5L0 923 aaKnown RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 COPG1Q9Y678 874 aaKnown RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 HRNRQ86YZ3 2850 aaPredicted RBP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 NIPBLQ6KC79 2804 aaeCLIP3.82□□□□□ -1.8
PTPRM-206ENST00000578093 UBA6A0AVT1 1052 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CCDC78A2IDD5 438 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 OR6C74A6NCV1 312 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 OR2AG2A6NM03 316 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 GPR89AB7ZAQ6 455 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TMEM150CB9EJG8 249 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 H3BMH7 237 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 BTN3A1O00481 513 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 ZNF749O43361 778 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 LDB2O43679 373 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 BUD23O43709 281 aaKnown RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 SGTAO43765 313 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 VEGFDO43915 354 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UGT1A9O60656 530 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 DIAPH2O60879 1101 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CDK14O94921 469 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 ZBTB11O95625 1053 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 MT-CYBP00156 380 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 FTLP02792 175 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UMODP07911 640 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TMEM253P0C7T8 217 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 GPR89BP0CG08 455 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 DESP17661 470 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UGT1A6P19224 532 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 POLR2CP19387 275 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 ITGAXP20702 1163 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 CYP2A7P20853 494 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UGT1A1P22309 533 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UGT1A4P22310 534 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 HALP42357 657 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 GLRBP48167 497 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TDGF1P3P51864 188 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 ZNF135P52742 658 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 GSDMDP57764 484 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 RPL26P61254 145 aaKnown RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 HSD11B2P80365 405 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TMPRSS15P98073 1019 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 PDE1BQ01064 536 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 UBXN1Q04323 297 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 DMPKQ09013 629 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 TMEM115Q12893 351 aaPredicted RBP3.81□□□□□ -1.8
PTPRM-206ENST00000578093 XRCC4Q13426 336 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 KRT81Q14533 505 aa3.81□□□□□ -1.8
PTPRM-206ENST00000578093 PTPRCAPQ14761 206 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms