RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 VPS41P49754 854 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 VSX2P58304 361 aaPredicted RBP14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 TYSND1Q2T9J0 566 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 FAM214AQ32MH5 1076 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 YOD1Q5VVQ6 348 aaPredicted RBP14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 CASC4Q6P4E1 433 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 OVCH1Q7RTY7 1134 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 TMEM151BQ8IW70 566 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 LPGAT1Q92604 370 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 FAM136AQ96C01 138 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 BIRC8Q96P09 236 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 PSMG3-AS1Q96PY0 264 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 TCF12Q99081 682 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 SPATA7Q9P0W8 599 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 CDC23Q9UJX2 597 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 CRYL1Q9Y2S2 319 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 FAM169AQ9Y6X4 670 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 USP9XQ93008 2570 aaPredicted RBP14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 MAST4O15021 2626 aa14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 SPTAN1Q13813 2472 aaKnown RBP14.31□□□□□ -0.12
RN7SL560P-201ENST00000577943 A0A0J9YVX5 310 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 E5RI56 91 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 SRPX2O60687 465 aaPredicted RBP14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 CTSVO60911 334 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 ESR1P03372 595 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 PAMP19021 973 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 CHRM3P20309 590 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 ITGAXP20702 1163 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 OGNP20774 298 aaKnown RBP14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 MMP11P24347 488 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 ITGA3P26006 1051 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 GPS1Q13098 491 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 AIMP2Q13155 320 aaKnown RBP14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 KCNJ11Q14654 390 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 NKG7Q16617 165 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 PLEKHN1Q494U1 663 aaPredicted RBP14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 WASHC2DQ5SRD0 308 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 KIAA0930Q6ICG6 404 aaPredicted RBP14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 COX15Q7KZN9 410 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 LRRC8AQ8IWT6 810 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 IQCKQ8N0W5 287 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 ZADH2Q8N4Q0 377 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 METTL27Q8N6F8 245 aaPredicted RBP14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 OR2L3Q8NG85 312 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 HMGCLL1Q8TB92 370 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 TM9SF4Q92544 642 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 NACC2Q96BF6 587 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 ZNF285Q96NJ3 590 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 WDR54Q9H977 334 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 IL1RAPL1Q9NZN1 696 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 SAMD15Q9P1V8 674 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 ZC3H7BQ9UGR2 993 aaKnown RBP14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 B3GNT3Q9Y2A9 372 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 MAU2Q9Y6X3 613 aa14.3□□□□□ -0.12
RN7SL560P-201ENST00000577943 USP9YO00507 2555 aaPredicted RBP14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 A0A1W2PPV9 198 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 FITM1A5D6W6 292 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 TCP11X1B4DZS4 312 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 AVILO75366 819 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 MATN4O95460 622 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 ONECUT2O95948 504 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 EIF2S1P05198 315 aaKnown RBP14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 CMPK1P30085 196 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 OR1D4P47884 311 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 ADARP55265 1226 aaKnown RBP14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 SOX8P57073 446 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 FASTKQ14296 549 aaKnown RBP14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 NAA25Q14CX7 972 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 ANKRD20A4Q4UJ75 823 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 FRMPD2BQ6IN97 320 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 SHISA6Q6ZSJ9 500 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 PRELID2Q8N945 189 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 OR2A1Q8NGT9 310 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 OR9A1PQ8NGU1 263 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 SPSB2Q99619 263 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 ACAT2Q9BWD1 397 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 ILKAPQ9H0C8 392 aaPredicted RBP14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 SLC26A1Q9H2B4 701 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 SOX17Q9H6I2 414 aaPredicted RBP14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 SLC6A20Q9NP91 592 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 CTSFQ9UBX1 484 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 FBXL4Q9UKA2 621 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 NXT1Q9UKK6 140 aaKnown RBP14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 SCN3AQ9NY46 2000 aa14.29□□□□□ -0.12
RN7SL560P-201ENST00000577943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 LOC105369274A0A096LPK9 316 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 LOC102723532A0A0G2JNH3 316 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 HYKKA2RU49 373 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 SOCS6O14544 535 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 NRDCO43847 1150 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 ALOX12BO75342 701 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 KRT14P02533 472 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 ERVK-10P10266 1014 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 PKMP14618 531 aaKnown RBP14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 ATP5DP30049 168 aa14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 MRPL49Q13405 166 aaKnown RBP14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 TSTA3Q13630 321 aaPredicted RBP14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 DHX34Q14147 1143 aaKnown RBP14.28□□□□□ -0.12
RN7SL560P-201ENST00000577943 GBX1Q14549 363 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms