RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 ELFN1P0C7U0 828 aa17.45■□□□□ 0.38
ATPAF1-214ENST00000576409 CSKP41240 450 aa17.45■□□□□ 0.38
ATPAF1-214ENST00000576409 FOXM1Q08050 763 aa17.45■□□□□ 0.38
ATPAF1-214ENST00000576409 NEK5Q6P3R8 708 aa17.45■□□□□ 0.38
ATPAF1-214ENST00000576409 AGMOQ6ZNB7 445 aa17.45■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF599Q96NL3 588 aa17.45■□□□□ 0.38
ATPAF1-214ENST00000576409 RAD18Q9NS91 495 aa17.45■□□□□ 0.38
ATPAF1-214ENST00000576409 MCUBQ9NWR8 336 aa17.45■□□□□ 0.38
ATPAF1-214ENST00000576409 CPNE3O75131 537 aaKnown RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 UGT2B17O75795 530 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 PSKH1P11801 424 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 CKMT1AP12532 417 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 PRG2P13727 222 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TNFRSF1BP20333 461 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 SERINC3Q13530 473 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF697Q5TEC3 545 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 C16orf62Q7Z3J2 963 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 LAPTM4BQ86VI4 370 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 CHERPQ8IWX8 916 aaKnown RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 FAM217AQ8IXS0 508 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 LRRC17Q8N6Y2 441 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 HDAC2Q92769 488 aaKnown RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 C8orf48Q96LL4 319 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 ZCCHC2Q9C0B9 1178 aaKnown RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 FARSBQ9NSD9 589 aaKnown RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 PCDHGA8Q9Y5G5 932 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 PORP16435 677 aaPredicted RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 ERVPABLB-1P60509 514 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TXNL4AP83876 142 aaKnown RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 ZXDBP98169 803 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 RAPSNQ13702 412 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TYSND1Q2T9J0 566 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF648Q5T619 568 aaPredicted RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 FRG2Q64ET8 278 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 FAM180BQ6P0A1 224 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 SMARCD3Q6STE5 483 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TTC9BQ8N6N2 239 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 DTX3Q8N9I9 347 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 ZMIZ2Q8NF64 920 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 FRG2BQ96QU4 278 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 GMEB1Q9Y692 573 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 DNMT3AQ9Y6K1 912 aaPredicted RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 MANBAO00462 879 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 SERPINB7O75635 380 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 CCNB2O95067 398 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 SSR2P43308 183 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 CCR4P51679 360 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 C9orf64Q5T6V5 341 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 IGFN1Q86VF2 1251 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TMEM102Q8N9M5 508 aaPredicted RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TEX47Q8TBZ9 253 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 BIRC8Q96P09 236 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 SLC38A2Q96QD8 506 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TBX5Q99593 518 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 DNAJC27Q9NZQ0 273 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 VAPAQ9P0L0 249 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TMEM181Q9P2C4 612 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 KIF13AQ9H1H9 1805 aa17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
ATPAF1-214ENST00000576409 TRBV23OR9-2A0A075B6M9 112 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 SLC1A7O00341 560 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 PRKAR1AP10644 381 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 GPX3P22352 226 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 PPIBP23284 216 aaKnown RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 LCN8Q6JVE9 175 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 CAPN13Q6MZZ7 669 aaPredicted RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 AUTS2Q8WXX7 1259 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 ITPAQ9BY32 194 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 POLR2J3Q9H1A7 115 aaKnown RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 ING3Q9NXR8 418 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 VPS29Q9UBQ0 182 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 OR6C70A6NIJ9 312 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 NME6O75414 186 aaPredicted RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 NSG1P42857 185 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 KCNC1P48547 511 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 RPP38P78345 283 aaKnown RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 MTAPQ13126 283 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 FNDC3BQ53EP0 1204 aaKnown RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 TXNDC8Q6A555 127 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 ASB18Q6ZVZ8 466 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 LARP4Q71RC2 724 aaKnown RBP eCLIP17.43■□□□□ 0.383e-7■□□□□ 10.9
ATPAF1-214ENST00000576409 RAD51AP1Q96B01 352 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 CORO2BQ9UQ03 480 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 ZBTB42B2RXF5 422 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 CH25HO95992 272 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 BCKDHAP12694 445 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 HSD17B1P14061 328 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 FPR1P21462 350 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 MAPK8P45983 427 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 TAS2R41P59536 307 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 PTPRRQ15256 657 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 HSF5Q4G112 596 aaPredicted RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 IQCCQ4KMZ1 466 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 SYCE2Q6PIF2 218 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 USP43Q70EL4 1123 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 AP2M1Q96CW1 435 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 SDR39U1Q9NRG7 319 aaPredicted RBP17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 ERVK13-1Q9NX77 482 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 PKD1L3Q7Z443 1732 aa17.43■□□□□ 0.38
ATPAF1-214ENST00000576409 SLC38A8A6NNN8 435 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms