RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 GPN3Q9UHW5 284 aaPredicted RBP14.68□□□□□ -0.06
SMG6-220ENST00000576218 SRPK3Q9UPE1 567 aa14.68□□□□□ -0.06
SMG6-220ENST00000576218 TK2O00142 265 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 TUBB4AP04350 444 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 C8GP07360 202 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 GRIA3P42263 894 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 CCR10P46092 362 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 SLC7A5Q01650 507 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 SP140Q13342 867 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 FASTKQ14296 549 aaKnown RBP14.67□□□□□ -0.06
SMG6-220ENST00000576218 FRG1Q14331 258 aaKnown RBP14.67□□□□□ -0.06
SMG6-220ENST00000576218 TBR1Q16650 682 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 CYP2A13Q16696 494 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 DEFB109BQ30KR1 87 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 PTCHD3Q3KNS1 767 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 C1orf189Q5VU69 101 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 PAQR3Q6TCH7 311 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 ZNF572Q7Z3I7 529 aaPredicted RBP14.67□□□□□ -0.06
SMG6-220ENST00000576218 SLC26A11Q86WA9 606 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 MCATQ8IVS2 390 aaKnown RBP14.67□□□□□ -0.06
SMG6-220ENST00000576218 DSELQ8IZU8 1212 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 PPFIBP2Q8ND30 876 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 OR2L3Q8NG85 312 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 DENND1AQ8TEH3 1009 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 EEF1AKMT1Q8WVE0 214 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 ASB11Q8WXH4 323 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 SEC14L1Q92503 715 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 DLG3Q92796 817 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 ZUFSPQ96AP4 578 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 ALKBH8Q96BT7 664 aaKnown RBP14.67□□□□□ -0.06
SMG6-220ENST00000576218 MED8Q96G25 268 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 WBP1Q96G27 269 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 VPS39Q96JC1 886 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 C17orf62Q9BQA9 187 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 SELENOSQ9BQE4 189 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 GPR87Q9BY21 358 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 TRIM54Q9BYV2 358 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 CHRNA10Q9GZZ6 450 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 SPRTNQ9H040 489 aaPredicted RBP14.67□□□□□ -0.06
SMG6-220ENST00000576218 CHST8Q9H2A9 424 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 ACTL8Q9H568 366 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 EURLQ9NYK6 297 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 TAC3Q9UHF0 121 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 SNX7Q9UNH6 387 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 MED16Q9Y2X0 877 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 VWA7Q9Y334 891 aa14.67□□□□□ -0.06
SMG6-220ENST00000576218 CREG1O75629 220 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 SLC16A8O95907 504 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 ALAS2P22557 587 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 F8A1P23610 371 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 GABRB3P28472 473 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 PTPN4P29074 926 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 TCTE1Q5JU00 501 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 ATP1A1-AS1Q5TC04 95 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 CTAGE3PQ8IX95 158 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 DNAJC22Q8N4W6 341 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 FBXO15Q8NCQ5 510 aaPredicted RBP14.66□□□□□ -0.06
SMG6-220ENST00000576218 FBXO25Q8TCJ0 367 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 LRFN5Q96NI6 719 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 DPH2Q9BQC3 489 aaPredicted RBP14.66□□□□□ -0.06
SMG6-220ENST00000576218 CCDC177Q9NQR7 707 aaPredicted RBP14.66□□□□□ -0.06
SMG6-220ENST00000576218 PCMTD2Q9NV79 361 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 GRHL1Q9NZI5 618 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 PADI2Q9Y2J8 665 aa14.66□□□□□ -0.06
SMG6-220ENST00000576218 A0A0J9YVX5 310 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 FAM95CA0A1B0GW59 222 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 ESYT3A0FGR9 886 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 CTAGE15A4D2H0 777 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 TARM1B6A8C7 271 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 TP73O15350 636 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 PRB1P04280 392 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 EIF2S1P05198 315 aaKnown RBP14.65□□□□□ -0.06
SMG6-220ENST00000576218 FAM87AP0C7U9 286 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 CTAGE8P0CG41 777 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 FDXRP22570 491 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 SSTR1P30872 391 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 ARSFP54793 590 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 VSX2P58304 361 aaPredicted RBP14.65□□□□□ -0.06
SMG6-220ENST00000576218 RPS18P62269 152 aaKnown RBP14.65□□□□□ -0.06
SMG6-220ENST00000576218 GUCY2DQ02846 1103 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 ILF2Q12905 390 aaKnown RBP14.65□□□□□ -0.06
SMG6-220ENST00000576218 MLIPQ5VWP3 458 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 FCRL6Q6DN72 434 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 CTAGE6Q86UF2 777 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 SPNS2Q8IVW8 549 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 CTAGE4Q8IX94 777 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 ENDOVQ8N8Q3 282 aaKnown RBP14.65□□□□□ -0.06
SMG6-220ENST00000576218 SLC38A9Q8NBW4 561 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 KIF18AQ8NI77 898 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 PROKR1Q8TCW9 393 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 ZNF480Q8WV37 535 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 CCDC138Q96M89 665 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 LRRC1Q9BTT6 524 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 DPH7Q9BTV6 452 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 AKIRIN1Q9H9L7 192 aaPredicted RBP14.65□□□□□ -0.06
SMG6-220ENST00000576218 PARVBQ9HBI1 364 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 PLAC1Q9HBJ0 212 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 DHCR7Q9UBM7 475 aaKnown RBP14.65□□□□□ -0.06
SMG6-220ENST00000576218 POLHQ9Y253 713 aa14.65□□□□□ -0.06
SMG6-220ENST00000576218 FARSAQ9Y285 508 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms