RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SLC22A18Q96BI1 424 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 RHBDF1Q96CC6 855 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 L3HYPDHQ96EM0 354 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 IL17FQ96PD4 163 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 TMEM237Q96Q45 408 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 MIPEPQ99797 713 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 TMEM79Q9BSE2 394 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 HAUS8Q9BT25 410 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 TRMOQ9BU70 441 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 CD244Q9BZW8 370 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 DRC3Q9H069 523 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 NSRP1Q9H0G5 558 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 PCBD2Q9H0N5 130 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ATG10Q9H0Y0 220 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 EPB41L1Q9H4G0 881 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 XKR8Q9H6D3 395 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 EML4Q9HC35 981 aaKnown RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC40A1Q9NP59 571 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 DNAJC11Q9NVH1 559 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 OXSMQ9NWU1 459 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 KCNK4Q9NYG8 393 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR6C2Q9NZP2 312 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 OGFRQ9NZT2 677 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF624Q9P2J8 865 aaPredicted RBP6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 FTSJ1Q9UET6 329 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 TAC3Q9UHF0 121 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ICKQ9UPZ9 632 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 PCDHGB2Q9Y5G2 931 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 TTC28Q96AY4 2481 aa6.38□□□□□ -1.39
CTDNEP1-204ENST00000570484 ATG2BQ96BY7 2078 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 PIPSLA2A3N6 862 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CPED1A4D0V7 1026 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR6C74A6NCV1 312 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 ISM1B1AKI9 464 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 HGSO14964 777 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CLGNO14967 610 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SIGLEC6O43699 453 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 NUDT21O43809 227 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 KLK8O60259 260 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 UBXN7O94888 489 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SNUPNO95149 360 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SIX3O95343 332 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CHEK2O96017 543 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 OTCP00480 354 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 RPS17P08708 135 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 DHRS4L1P0CG22 281 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 MTHFD2P13995 350 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 GLB1P16278 677 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 AMD1P17707 334 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 IMPDH1P20839 514 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 ALDH4A1P30038 563 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CMPK1P30085 196 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 MDH1P40925 334 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CAPZBP47756 277 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 AGTR2P50052 363 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCNG1P51959 295 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 NAGLUP54802 743 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 DNAJB13P59910 316 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 GNGT1P63211 74 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 GUCY1A3Q02108 690 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CDC16Q13042 620 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 LCP2Q13094 533 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 STX3Q13277 289 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC14A1Q13336 389 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 GTF2H2Q13888 395 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 MPP2Q14168 576 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 RCN2Q14257 317 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 PCBP2Q15366 365 aaKnown RBP eCLIP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SHBQ15464 509 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CYP2A13Q16696 494 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 TUBB8Q3ZCM7 444 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 FBXO48Q5FWF7 155 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF678Q5SXM1 525 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 GTF2H2CQ6P1K8 395 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SUSD1Q6UWL2 747 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 FRMD7Q6ZUT3 714 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 GOLGA7Q7Z5G4 137 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 TMPRSS11BQ86T26 416 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 THOC6Q86W42 341 aaKnown RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 C17orf64Q86WR6 236 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF761Q86XN6 746 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 NAXDQ8IW45 347 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC35F3Q8IY50 421 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC25A45Q8N413 288 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 TBC1D19Q8N5T2 526 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 TEX9Q8N6V9 391 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 GPR156Q8NFN8 814 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 OR4E2Q8NGC2 313 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 DENND1AQ8TEH3 1009 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 ESAMQ96AP7 390 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCDC74AQ96AQ1 378 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 PYCR2Q96C36 320 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 APOLD1Q96LR9 279 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 MAGEB10Q96LZ2 347 aaPredicted RBP6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 MAGEB18Q96M61 343 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CAPS2Q9BXY5 557 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLC32A1Q9H598 525 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 CAAP1Q9H8G2 361 aa6.37□□□□□ -1.39
CTDNEP1-204ENST00000570484 MANSC1Q9H8J5 431 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms