RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 DUPD1Q68J44 220 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 TTC27Q6P3X3 843 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 LRRC31Q6UY01 552 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 HOOK3Q86VS8 718 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 CPXM2Q8N436 756 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 MREGQ8N565 214 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 TTC9BQ8N6N2 239 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 MRPL43Q8N983 215 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 POC5Q8NA72 575 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 AVL9Q8NBF6 648 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 GABPB2Q8TAK5 448 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 ACTL9Q8TC94 416 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 C1orf54Q8WWF1 131 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 NDRG1Q92597 394 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 AKAP1Q92667 903 aaKnown RBP eCLIP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 CASP10Q92851 521 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 TBC1D31Q96DN5 1066 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 RTP4Q96DX8 246 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 KLHL5Q96PQ7 755 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 CDCA3Q99618 268 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 DDX50Q9BQ39 737 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 FRMD8Q9BZ67 464 aaPredicted RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 NACA2Q9H009 215 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 NMUR1Q9HB89 426 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 FBRSL1Q9HCM7 1045 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 SPATS2LQ9NUQ6 558 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 MTMR10Q9NXD2 777 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 CWC15Q9P013 229 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 COX16Q9P0S2 106 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 OR12D3Q9UGF7 316 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 ASIC3Q9UHC3 531 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 R3HDM2Q9Y2K5 976 aaKnown RBP7.02□□□□□ -1.29
CNOT1-222ENST00000570139 OBSL1O75147 1896 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 GBF1Q92538 1859 aa7.02□□□□□ -1.29
CNOT1-222ENST00000570139 MTCL1Q9Y4B5 1905 aaKnown RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 ZNF840PA6NDX5 716 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 SGK1O00141 431 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 TP73O15350 636 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 PAGE4O60829 102 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 SEC24AO95486 1093 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 BAG2O95816 211 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 TSPAN15O95858 294 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 KRT14P02533 472 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 C8AP07357 584 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 C1QTNF9P0C862 333 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 HMGA1P17096 107 aaKnown RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 GOT1P17174 413 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 DIO1P49895 249 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 RAD23AP54725 363 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 SLC37A1P57057 533 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 DYNLT1P63172 113 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 NIPAL4Q0D2K0 466 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 EFEMP1Q12805 493 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 CSTF3Q12996 717 aaKnown RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 SLMAPQ14BN4 828 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 CA9Q16790 459 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 BEAN1Q3B7T3 259 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 BEND6Q5SZJ8 279 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 ATG9BQ674R7 924 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 NCBP2-AS2Q69YL0 99 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 NAPEPLDQ6IQ20 393 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 HMBOX1Q6NT76 420 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 MTFR2Q6P444 385 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 KYAT3Q6YP21 454 aaKnown RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 PPP1R21Q6ZMI0 780 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 CIR1Q86X95 450 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 CNPY4Q8N129 248 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 CHCHD4Q8N4Q1 142 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 PQLC3Q8N755 202 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 C12orf76Q8N812 135 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 BHLHE22Q8NFJ8 381 aaPredicted RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 AENQ8WTP8 325 aaKnown RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 TFB1MQ8WVM0 346 aaKnown RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 IFT81Q8WYA0 676 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 MRPS31Q92665 395 aaKnown RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 PTCD3Q96EY7 689 aaKnown RBP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 OLFM3Q96PB7 478 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 QKIQ96PU8 341 aaKnown RBP eCLIP7.01□□□□□ -1.29
CNOT1-222ENST00000570139 SNX18Q96RF0 628 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 FMO2Q99518 471 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 VAT1Q99536 393 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 SLC38A3Q99624 504 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 ASAH2Q9NR71 780 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 KLC4Q9NSK0 619 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 TBCCD1Q9NVR7 557 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 NCKIPSDQ9NZQ3 722 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 PAK5Q9P286 719 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 HSPB7Q9UBY9 170 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 DNPEPQ9ULA0 475 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 ZNF510Q9Y2H8 683 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 ADAM18Q9Y3Q7 739 aa7.01□□□□□ -1.29
CNOT1-222ENST00000570139 HELZP42694 1942 aaKnown RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 IGLV3-10A0A075B6K4 115 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 HSFX4A0A1B0GTS1 333 aaPredicted RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 HSFX3A0A1B0GWH4 333 aaPredicted RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 KRTAP23-1A1A580 65 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 TYW5A2RUC4 315 aaKnown RBP7□□□□□ -1.29
CNOT1-222ENST00000570139 GLOD5A6NK44 160 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 H7C0C1 242 aa7□□□□□ -1.29
CNOT1-222ENST00000570139 DNALI1O14645 258 aaPredicted RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms