RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 NKAIN2Q5VXU1 208 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 ARMC3Q5W041 872 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 ARHGAP22Q7Z5H3 698 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 TMEM135Q86UB9 458 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 UNC5BQ8IZJ1 945 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 TRAM1L1Q8N609 369 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 DNAAF3Q8N9W5 541 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 OR4K2Q8NGD2 314 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 CPT1CQ8TCG5 803 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 FBXO25Q8TCJ0 367 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 PATE1Q8WXA2 126 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 PEX13Q92968 403 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 AP2M1Q96CW1 435 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 SLC38A3Q99624 504 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 RAB17Q9H0T7 212 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 FAM83DQ9H4H8 585 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 STN1Q9H668 368 aaKnown RBP6.95□□□□□ -1.3
CNOT1-218ENST00000569732 RRAGDQ9NQL2 400 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-218ENST00000569732 SMOXQ9NWM0 555 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 PKD2L2Q9NZM6 624 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 TMEM9Q9P0T7 183 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 DUSP13Q9UII6 198 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 ANAPC5Q9UJX4 755 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 KCND3Q9UK17 655 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 POLHQ9Y253 713 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 RPS6KL1Q9Y6S9 549 aa6.95□□□□□ -1.3
CNOT1-218ENST00000569732 TRBV5-4A0A0C4DH59 114 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 GLYATL1P3A0A0U1RQE8 302 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ZCWPW2A0A1B0GU75 182 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 FAM237BA0A1B0GVD1 139 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 TCRBV16S1A1N1A0A5B0 115 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 CCDC78A2IDD5 438 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 CCDC162PA2VCL2 907 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 OR51F1A6NGY5 319 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SDR42E2A6NKP2 422 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 STX7O15400 261 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SEMA7AO75326 666 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 FUCA1P04066 466 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 IVLP07476 585 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PRSS56P0CW18 603 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 NAT1P18440 290 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PAMP19021 973 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ELAVL4P26378 380 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 AK4P27144 223 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 NMBRP28336 390 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 FOXN2P32314 431 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ACTR1BP42025 376 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 TNNT3P45378 269 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PMS2P54278 862 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ACTR1AP61163 376 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SARNPP82979 210 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 CDK3Q00526 305 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PDE1BQ01064 536 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 GUCY1A3Q02108 690 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 LRP8Q14114 963 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 DOC2BQ14184 412 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SEMA3AQ14563 771 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 FASTKD3Q14CZ7 662 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 CHRNA6Q15825 494 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ATP13A5Q4VNC0 1218 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 KHDC1Q4VXA5 237 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ATP1A1-AS1Q5TC04 95 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ZDHHC20Q5W0Z9 365 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ALS2CLQ60I27 953 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 STEAP4Q687X5 459 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PDPK2PQ6A1A2 396 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SLC30A9Q6PML9 568 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 FAM151BQ6UXP7 276 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 RNF111Q6ZNA4 994 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 NLRP9Q7RTR0 991 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 APLFQ8IW19 511 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PIANPQ8IYJ0 282 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 BBOF1Q8ND07 529 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PPHLN1Q8NEY8 458 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 STYXQ8WUJ0 223 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 CDKN2AIPNLQ96HQ2 116 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 VPS35Q96QK1 796 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 EBNA1BP2Q99848 306 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 CTRCQ99895 268 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ZFYVE21Q9BQ24 234 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ZSCAN5AQ9BUG6 496 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 FRMD8Q9BZ67 464 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 EPB41L1Q9H4G0 881 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SUDS3Q9H7L9 328 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ANKZF1Q9H8Y5 726 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SEMA3GQ9NS98 782 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 AP5S1Q9NUS5 200 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 BFARQ9NZS9 450 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 TMEFF2Q9UIK5 374 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SUFUQ9UMX1 484 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 SLC17A4Q9Y2C5 497 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 UTP11Q9Y3A2 253 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PKP3Q9Y446 797 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PCDHA9Q9Y5H5 950 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 PCYT1BQ9Y5K3 369 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 NPFFR2Q9Y5X5 522 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 TEX264Q9Y6I9 313 aa6.94□□□□□ -1.3
CNOT1-218ENST00000569732 OAS3Q9Y6K5 1087 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 ZNF106Q9H2Y7 1883 aaKnown RBP6.94□□□□□ -1.3
CNOT1-218ENST00000569732 IGLV3-16A0A075B6K0 115 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms