RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 CHRM5P08912 532 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-225ENST00000569245 PRKAR1AP10644 381 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 PVRP15151 417 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 CHRM3P20309 590 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 DLSTP36957 453 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 STAT5AP42229 794 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 LY6DQ14210 128 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 TTMPQ5BVD1 217 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 ZNF789Q5FWF6 425 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 SPESP1Q6UW49 350 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 PCSK4Q6UW60 755 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 TRABD2AQ86V40 505 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 LPGAT1Q92604 370 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 N4BP2L2Q92802 583 aaPredicted RBP13.99□□□□□ -0.17
COMMD4-225ENST00000569245 ISL2Q96A47 359 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 ZBTB9Q96C00 473 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 ATP6V1G3Q96LB4 118 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 FCRL4Q96PJ5 515 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 GPR22Q99680 433 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 CENPHQ9H3R5 247 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 FAM53CQ9NYF3 392 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 SENP1Q9P0U3 644 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 CIDEBQ9UHD4 219 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 IL17BQ9UHF5 180 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 TSR3Q9UJK0 312 aaKnown RBP13.99□□□□□ -0.17
COMMD4-225ENST00000569245 CROTQ9UKG9 612 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 CDYLQ9Y232 598 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 BTRCQ9Y297 605 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 SDK2Q58EX2 2172 aa13.99□□□□□ -0.17
COMMD4-225ENST00000569245 TRIM49D1C9J1S8 452 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 E5RI56 91 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 NKX2-8O15522 239 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 F7P08709 466 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-225ENST00000569245 ST6GAL1P15907 406 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 KRT15P19012 456 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 TBR1Q16650 682 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 CTSL3PQ5NE16 218 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 MROH9Q5TGP6 573 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 CNSTQ6PJW8 725 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 UNC5DQ6UXZ4 953 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 TRIM73Q86UV7 250 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 DCUN1D3Q8IWE4 304 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 C2orf73Q8N5S3 287 aaPredicted RBP13.98□□□□□ -0.17
COMMD4-225ENST00000569245 OR8K5Q8NH50 307 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 SLC45A3Q96JT2 553 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 FOPNLQ96NB1 174 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 BIRC8Q96P09 236 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 TRAPPC9Q96Q05 1148 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 SLC12A9Q9BXP2 914 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 PITPNM3Q9BZ71 974 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 SPHK1Q9NYA1 384 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 SLC39A10Q9ULF5 831 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 MTO1Q9Y2Z2 717 aaKnown RBP13.98□□□□□ -0.17
COMMD4-225ENST00000569245 ACTL7BQ9Y614 415 aa13.98□□□□□ -0.17
COMMD4-225ENST00000569245 FAM95CA0A1B0GW59 222 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 TMEM150CB9EJG8 249 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 CPNE3O75131 537 aaKnown RBP13.97□□□□□ -0.17
COMMD4-225ENST00000569245 NIPSNAP2O75323 286 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 TPBGLP0DKB5 382 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 UGT2B7P16662 529 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 TCN2P20062 427 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 MAGEA12P43365 314 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 RAB28P51157 221 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 MC1RQ01726 317 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 POU4F1Q01851 419 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 C19orf57Q0VDD7 668 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 BMPR2Q13873 1038 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 PLEKHS1Q5SXH7 462 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 C16orf46Q6P387 395 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 EXOC3L1Q86VI1 746 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 RAB42Q8N4Z0 105 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 STARD8Q92502 1023 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 ZNF501Q96CX3 271 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-225ENST00000569245 OR2A14Q96R47 310 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 SLC7A5P2Q9GIP4 190 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 CCDC68Q9H2F9 335 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 SYTL2Q9HCH5 934 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 LHX9Q9NQ69 397 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 SERTAD3Q9UJW9 196 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 NOVA2Q9UNW9 492 aaKnown RBP13.97□□□□□ -0.17
COMMD4-225ENST00000569245 PCDHB3Q9Y5E6 796 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 MRPS18BQ9Y676 258 aaKnown RBP13.97□□□□□ -0.17
COMMD4-225ENST00000569245 COMMD10Q9Y6G5 202 aa13.97□□□□□ -0.17
COMMD4-225ENST00000569245 A0A1W2PPM1 405 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 H3BQF6 201 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 RFPL1O75677 317 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 FAM87AP0C7U9 286 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 PKMP14618 531 aaKnown RBP13.96□□□□□ -0.17
COMMD4-225ENST00000569245 CYP2A7P20853 494 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 CD9P21926 228 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 F8A1P23610 371 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 PKLRP30613 574 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 SERPINB8P50452 374 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 CSRP3P50461 194 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 KIR2DS3Q14952 304 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 LINC00303Q3SY05 128 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 FAM45BPQ6NSW5 357 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 ZNF549Q6P9A3 640 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 BORAQ6PGQ7 559 aa13.96□□□□□ -0.17
COMMD4-225ENST00000569245 SH2D5Q6ZV89 423 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms