RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 EPOP01588 193 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 KRT6AP02538 564 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 KRT6BP04259 564 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 FAM163BP0C2L3 166 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 BPIP17213 487 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 DGKAP23743 735 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 KRT6CP48668 564 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 CD97P48960 835 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 TMBIM6P55061 237 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 MEF2AQ02078 507 aaPredicted RBP8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 CREMQ03060 361 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 NFATC2Q13469 925 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 DSC3Q14574 896 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 LAIR2Q6ISS4 152 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 NCCRP1Q6ZVX7 275 aaPredicted RBP8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 SCML4Q8N228 414 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 UBE2J2Q8N2K1 259 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 TTC30BQ8N4P2 665 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 OR4K1Q8NGD4 311 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 OR5K1Q8NHB7 308 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 MCFD2Q8NI22 146 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 FUBP3Q96I24 572 aaKnown RBP eCLIP8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 FAM210AQ96ND0 272 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 SMAD5Q99717 465 aaKnown RBP8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 NEURL2Q9BR09 285 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 CD244Q9BZW8 370 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 PPT2Q9UMR5 302 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 CPQQ9Y646 472 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 ZNF236Q9UL36 1845 aa8.73□□□□□ -1.01
HDGFL3-206ENST00000568294 KPNA5O15131 536 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 RGS5O15539 181 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 PQBP1O60828 265 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CLDN9O95484 217 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ANXA5P08758 320 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 GSTM2P28161 218 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ST13P50502 369 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 DAPP51397 102 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 PPP2R2BQ00005 443 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CHIT1Q13231 466 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 SLC16A12Q6ZSM3 486 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 SPATC1Q76KD6 591 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 RBM12BQ8IXT5 1001 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 RBFAQ8N0V3 343 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 LILRA3Q8N6C8 439 aaPredicted RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CAPSLQ8WWF8 208 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 HDAC2Q92769 488 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 PYURFQ96I23 114 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ALPK1Q96QP1 1244 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 TTPALQ9BTX7 342 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 POPDC3Q9HBV1 291 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 HEBP1Q9NRV9 189 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 POU2F3Q9UKI9 436 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 TMEM88BA6NKF7 163 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 FAM227AF5H4B4 570 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CLIC1O00299 241 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ANKRD28O15084 1053 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 SERPINB7O75635 380 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ZNF12P17014 697 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 SERPINB1P30740 379 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 KIR3DL1P43629 444 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 PREPP48147 710 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ISL1P61371 349 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 IRF8Q02556 426 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ZNF846Q147U1 533 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 TCEA2Q15560 299 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ATP13A5Q4VNC0 1218 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 XKR6Q5GH73 641 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CYP2U1Q7Z449 544 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CCDC103Q8IW40 242 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 GPR26Q8NDV2 337 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 FAR1Q8WVX9 515 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ISG20Q96AZ6 181 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 RHBDF1Q96CC6 855 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 MAGED4Q96JG8 741 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 KCNS3Q9BQ31 491 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ATP13A3Q9H7F0 1226 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 REEP1Q9H902 201 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 AASDHPPTQ9NRN7 309 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 INTS6Q9UL03 887 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 LOC285556D6RIA3 1793 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ZNF840PA6NDX5 716 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 NPIPB15A6NHN6 443 aaPredicted RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 PSMD11O00231 422 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 SEPT4O43236 478 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 RGS10O43665 173 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CPNE6O95741 557 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 SDC1P18827 310 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 KRT20P35900 424 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 NR4A2P43354 598 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CLK3P49761 638 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CLCA4Q14CN2 919 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 RBM48Q5RL73 367 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 LRRC66Q68CR7 880 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 CXorf57Q6NSI4 855 aaKnown RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ZNF551Q7Z340 670 aaPredicted RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 TERB1Q8NA31 727 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 FAM83FQ8NEG4 500 aaPredicted RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ZNF641Q96N77 438 aaPredicted RBP8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 COPS8Q99627 209 aa8.72□□□□□ -1.01
HDGFL3-206ENST00000568294 ACAT2Q9BWD1 397 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms