RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 VASH2Q86V25 355 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 BPHLQ86WA6 291 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-213ENST00000568158 LRRC56Q8IYG6 542 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-213ENST00000568158 SYTL1Q8IYJ3 562 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 CACNA2D3Q8IZS8 1091 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 NKAPQ8N5F7 415 aaKnown RBP12.52□□□□□ -0.41
CNOT1-213ENST00000568158 GALNT6Q8NCL4 622 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 SMPDL3AQ92484 453 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 CCDC138Q96M89 665 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 GPR22Q99680 433 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 ULBP3Q9BZM4 244 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 UNKQ9C0B0 810 aaKnown RBP12.52□□□□□ -0.41
CNOT1-213ENST00000568158 SPRTNQ9H040 489 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-213ENST00000568158 ATG10Q9H0Y0 220 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 CPNE5Q9HCH3 593 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 GPAMQ9HCL2 828 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 STOX2Q9P2F5 926 aaPredicted RBP12.52□□□□□ -0.41
CNOT1-213ENST00000568158 SERTAD3Q9UJW9 196 aa12.52□□□□□ -0.41
CNOT1-213ENST00000568158 CACNA1BQ00975 2339 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 LOC101059948A0A1B0GTJ6 334 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 WISP3O95389 354 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 HIST1H2AGP0C0S8 130 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 ZNF37AP17032 561 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 WT1P19544 449 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 HIST1H2ADP20671 130 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 RPA3P35244 121 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 HSD17B2P37059 387 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 UAP1Q16222 522 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 ZXDCQ2QGD7 858 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 MANEAQ5SRI9 462 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 BROXQ5VW32 411 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 FBXO42Q6P3S6 717 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 C6orf15Q6UXA7 325 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 GSPT2Q8IYD1 628 aaKnown RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 NLGN4XQ8N0W4 816 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 IL22RA1Q8N6P7 574 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 SLC38A9Q8NBW4 561 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 NLGN4YQ8NFZ3 816 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 OR2L3Q8NG85 312 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 ZUFSPQ96AP4 578 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 ALKBH8Q96BT7 664 aaKnown RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 HIST1H2AHQ96KK5 128 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 FCRL4Q96PJ5 515 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 CCNL2Q96S94 520 aaPredicted RBP12.51□□□□□ -0.41
CNOT1-213ENST00000568158 CYTH2Q99418 400 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 HIST1H2AJQ99878 128 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 H2AFJQ9BTM1 129 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 FUT8Q9BYC5 575 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 ACSS3Q9H6R3 686 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
CNOT1-213ENST00000568158 HMX2A2RU54 273 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 NPEPPSL1A6NEC2 478 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 POC1B-GALNT4F8VUJ3 575 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 NRP2O60462 931 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 SCRG1O75711 98 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 GUCA1CO95843 209 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 CCDC166P0CW27 439 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 STMN1P16949 149 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 CMPK1P30085 196 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 PRDX1Q06830 199 aaKnown RBP12.5□□□□□ -0.41
CNOT1-213ENST00000568158 ILF2Q12905 390 aaKnown RBP12.5□□□□□ -0.41
CNOT1-213ENST00000568158 SP140Q13342 867 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 NAB1Q13506 487 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 NAE1Q13564 534 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 BMPR2Q13873 1038 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 SLMAPQ14BN4 828 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 MROH9Q5TGP6 573 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 CYB5D1Q6P9G0 228 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 FAM199XQ6PEV8 388 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-213ENST00000568158 AGTRAPQ6RW13 159 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 CMC1Q7Z7K0 106 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 TMEM126BQ8IUX1 230 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 MCATQ8IVS2 390 aaKnown RBP12.5□□□□□ -0.41
CNOT1-213ENST00000568158 OR8K5Q8NH50 307 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 N4BP2L2Q92802 583 aaPredicted RBP12.5□□□□□ -0.41
CNOT1-213ENST00000568158 TSPAN17Q96FV3 270 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 DPH7Q9BTV6 452 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 TRIM54Q9BYV2 358 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 CHRNA10Q9GZZ6 450 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 POPDC3Q9HBV1 291 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 SLC6A20Q9NP91 592 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 MRPS30Q9NP92 439 aaKnown RBP12.5□□□□□ -0.41
CNOT1-213ENST00000568158 INTS7Q9NVH2 962 aaKnown RBP12.5□□□□□ -0.41
CNOT1-213ENST00000568158 UTP6Q9NYH9 597 aaKnown RBP12.5□□□□□ -0.41
CNOT1-213ENST00000568158 EURLQ9NYK6 297 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 CTNNAL1Q9UBT7 734 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 TAC3Q9UHF0 121 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 PLCL2Q9UPR0 1127 aa12.5□□□□□ -0.41
CNOT1-213ENST00000568158 HEATR5BQ9P2D3 2071 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 IGKV1-8A0A0C4DH67 115 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 ZNF839A8K0R7 811 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 TARM1B6A8C7 271 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 H3BMH7 237 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 ZNF749O43361 778 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 CTSVO60911 334 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 FKBP9O95302 570 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 MSL3P1P0C860 447 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 MYBL2P10244 700 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 LIFP15018 202 aa12.49□□□□□ -0.41
CNOT1-213ENST00000568158 ATP1A2P50993 1020 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms