RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 CCDC81Q6ZN84 652 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 TMEM126BQ8IUX1 230 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 LRRC56Q8IYG6 542 aaPredicted RBP20.82■□□□□ 0.92
NME3-210ENST00000567271 SYTL1Q8IYJ3 562 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 NKAPQ8N5F7 415 aaKnown RBP20.82■□□□□ 0.92
NME3-210ENST00000567271 OR2L3Q8NG85 312 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 ZUFSPQ96AP4 578 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 CCDC138Q96M89 665 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 GPR22Q99680 433 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 RHOXF2Q9BQY4 288 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 CDC42EP4Q9H3Q1 356 aaKnown RBP20.82■□□□□ 0.92
NME3-210ENST00000567271 KLK4Q9Y5K2 254 aa20.82■□□□□ 0.92
NME3-210ENST00000567271 TARM1B6A8C7 271 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 FAM155BO75949 473 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 NTRK1P04629 796 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 PHBP35232 272 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 RPA3P35244 121 aaPredicted RBP20.81■□□□□ 0.92
NME3-210ENST00000567271 SLC12A2P55011 1212 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 CXADRP78310 365 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 ABHD18Q0P651 414 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 PHKG1Q16816 387 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 UBAP2Q5T6F2 1119 aaKnown RBP20.81■□□□□ 0.92
NME3-210ENST00000567271 PPFIBP2Q8ND30 876 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 ACAT2Q9BWD1 397 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 CAB39LQ9H9S4 337 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 GPAMQ9HCL2 828 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 IKZF3Q9UKT9 509 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 NFU1Q9UMS0 254 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 PCDHB3Q9Y5E6 796 aa20.81■□□□□ 0.92
NME3-210ENST00000567271 LOC101059948A0A1B0GTJ6 334 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 K7ENP7 123 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 ZNF500O60304 480 aaPredicted RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 WISP3O95389 354 aaPredicted RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 MT-ND3P03897 115 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 HIST1H2AGP0C0S8 130 aaPredicted RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 HIST1H2ADP20671 130 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 ITGA1P56199 1179 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 YBX1P67809 324 aaKnown RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 VAC14Q08AM6 782 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 TSTA3Q13630 321 aaPredicted RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 USP10Q14694 798 aaKnown RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 EFTUD2Q15029 972 aaKnown RBP eCLIP20.8■□□□□ 0.926e-11■■■■■ 37.4
NME3-210ENST00000567271 DEFB110Q30KQ9 67 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 PRAMEF17Q5VTA0 474 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 INO80CQ6PI98 192 aaPredicted RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 SNRNP27Q8WVK2 155 aaKnown RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 ANKRD49Q8WVL7 239 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 ANKRD7Q92527 254 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 N4BP2L2Q92802 583 aaPredicted RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 TSPAN17Q96FV3 270 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 HIST1H2AHQ96KK5 128 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 CYTH2Q99418 400 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 HIST1H2AJQ99878 128 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 H2AFJQ9BTM1 129 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 FUT8Q9BYC5 575 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 STOX2Q9P2F5 926 aaPredicted RBP20.8■□□□□ 0.92
NME3-210ENST00000567271 LHX6Q9UPM6 363 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 PLCL2Q9UPR0 1127 aa20.8■□□□□ 0.92
NME3-210ENST00000567271 H3BMH7 237 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 CPNE3O75131 537 aaKnown RBP20.79■□□□□ 0.92
NME3-210ENST00000567271 ENO2P09104 434 aaPredicted RBP20.79■□□□□ 0.92
NME3-210ENST00000567271 CCNYL3P0C7X3 344 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 SPTBP11277 2137 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 LIFP15018 202 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 WT1P19544 449 aaPredicted RBP20.79■□□□□ 0.92
NME3-210ENST00000567271 CMPK1P30085 196 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 STAT5AP42229 794 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 PRDX1Q06830 199 aaKnown RBP20.79■□□□□ 0.92
NME3-210ENST00000567271 MBOAT1Q6ZNC8 495 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 SLC38A9Q8NBW4 561 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 SPRTNQ9H040 489 aaPredicted RBP20.79■□□□□ 0.92
NME3-210ENST00000567271 ACSS3Q9H6R3 686 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 EURLQ9NYK6 297 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 TAC3Q9UHF0 121 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 PADI1Q9ULC6 663 aa20.79■□□□□ 0.92
NME3-210ENST00000567271 NOVA2Q9UNW9 492 aaKnown RBP20.79■□□□□ 0.92
NME3-210ENST00000567271 E7EQ34 232 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 CTSBP07858 339 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 STMN1P16949 149 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 AP1S2P56377 157 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 ZKSCAN8Q15776 578 aaPredicted RBP20.78■□□□□ 0.92
NME3-210ENST00000567271 ZC3H12BQ5HYM0 836 aaKnown RBP20.78■□□□□ 0.92
NME3-210ENST00000567271 ARHGAP40Q5TG30 622 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 ICE2Q659A1 982 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 AGTRAPQ6RW13 159 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 SBSNQ6UWP8 590 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 MCATQ8IVS2 390 aaKnown RBP20.78■□□□□ 0.92
NME3-210ENST00000567271 GPR135Q8IZ08 494 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 LRFN5Q96NI6 719 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 DPH7Q9BTV6 452 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 TRIM54Q9BYV2 358 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 SLC6A20Q9NP91 592 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 MRPS30Q9NP92 439 aaKnown RBP20.78■□□□□ 0.92
NME3-210ENST00000567271 LHX9Q9NQ69 397 aa20.78■□□□□ 0.92
NME3-210ENST00000567271 PCM1Q15154 2024 aa20.77■□□□□ 0.92
NME3-210ENST00000567271 CDC7O00311 574 aa20.77■□□□□ 0.92
NME3-210ENST00000567271 PHGDHO43175 533 aaKnown RBP20.77■□□□□ 0.92
NME3-210ENST00000567271 ZNF749O43361 778 aa20.77■□□□□ 0.92
NME3-210ENST00000567271 OR2B3O76000 313 aa20.77■□□□□ 0.92
NME3-210ENST00000567271 CCNDBP1O95273 360 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms