RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 NSMCE1Q8WV22 266 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 PIH1D2Q8WWB5 315 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 HAUS1Q96CS2 278 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 Q96MF0 132 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 NSMCE3Q96MG7 304 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 CSPG4P5Q96PW8 444 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 FAM118BQ9BPY3 351 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 ZNF670Q9BS34 389 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 SLC39A8Q9C0K1 460 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 DMRT3Q9NQL9 472 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 PSMD13Q9UNM6 376 aa9.28□□□□□ -0.92
CAPN3-216ENST00000567071 C1orf232A0A0U1RR37 186 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 APOL1O14791 398 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 DAPK3O43293 454 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 CST8O60676 142 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 CLDN7O95471 211 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 SERPINA7P05543 415 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 PECAM1P16284 738 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-216ENST00000567071 CA4P22748 312 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 NDUFS1P28331 727 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 EEF1DP29692 281 aaKnown RBP9.27□□□□□ -0.93
CAPN3-216ENST00000567071 PTPN7P35236 360 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 C2orf54Q08AI8 447 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 DPYSQ14117 519 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 TFDP2Q14188 446 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 NKG7Q16617 165 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 RIPOR1Q6ZS17 1223 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 CDHR3Q6ZTQ4 885 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 RFX8Q6ZV50 586 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 C11orf96Q7Z7L8 435 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 CCDC71Q8IV32 467 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-216ENST00000567071 ZNF655Q8N720 491 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-216ENST00000567071 TMEM178AQ8NBL3 297 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 ACTRT1Q8TDG2 376 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 FAF2Q96CS3 445 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 SEC16BQ96JE7 1060 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 TTC25Q96NG3 672 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 RNF157Q96PX1 679 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 CRB3Q9BUF7 120 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 ZSCAN5AQ9BUG6 496 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 CARD6Q9BX69 1037 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 MAK16Q9BXY0 300 aaKnown RBP9.27□□□□□ -0.93
CAPN3-216ENST00000567071 AMBRA1Q9C0C7 1298 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 SLC6A16Q9GZN6 736 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 SOX17Q9H6I2 414 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-216ENST00000567071 KIR3DX1Q9H7L2 352 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 L2HGDHQ9H9P8 463 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 ETNK2Q9NVF9 386 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 SLC24A2Q9UI40 661 aa9.27□□□□□ -0.93
CAPN3-216ENST00000567071 R3HDM2Q9Y2K5 976 aaKnown RBP9.27□□□□□ -0.93
CAPN3-216ENST00000567071 PHF3Q92576 2039 aaKnown RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 MFSD11O43934 449 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 TJP3O95049 919 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 PVRP15151 417 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 PRDX3P30048 256 aaKnown RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 PTGS2P35354 604 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 HSF1Q00613 529 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 GBE1Q04446 702 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 ZNF33BQ06732 778 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SLC10A7Q0GE19 358 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 KLF1Q13351 362 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SNX1Q13596 522 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SIX1Q15475 284 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 NCBP2-AS2Q69YL0 99 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 PDPK2PQ6A1A2 396 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 NPNTQ6UXI9 565 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SHISA6Q6ZSJ9 500 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 BBS12Q6ZW61 710 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 AMZ2Q86W34 360 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 TMEM151BQ8IW70 566 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 PLD5Q8N7P1 536 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 OR4E2Q8NGC2 313 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 FAM57AQ8TBR7 257 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 C1orf54Q8WWF1 131 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 ATG4AQ8WYN0 398 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 PSMF1Q92530 271 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 GLYATL1Q969I3 302 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 C12orf66Q96MD2 445 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 NAP1L3Q99457 506 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SPSB2Q99619 263 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 TRIM51Q9BSJ1 452 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SGPP1Q9BX95 441 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 PITPNM3Q9BZ71 974 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SPRTNQ9H040 489 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 KLHL25Q9H0H3 589 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 TP63Q9H3D4 680 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SRMSQ9H3Y6 488 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 SAE1Q9UBE0 346 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 TTC7AQ9ULT0 858 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 HEY1Q9Y5J3 304 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 CFAP20Q9Y6A4 193 aaKnown RBP9.26□□□□□ -0.93
CAPN3-216ENST00000567071 COLEC10Q9Y6Z7 277 aa9.26□□□□□ -0.93
CAPN3-216ENST00000567071 GOLGA6L10A0A0M3HER8 536 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 A0A1B0GX78 115 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 CTAGE15A4D2H0 777 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 ZNF487B1APH4 448 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 RASGRF2O14827 1237 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 SMPD2O60906 423 aa9.25□□□□□ -0.93
CAPN3-216ENST00000567071 PDHA1P08559 390 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms