RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 FASTKQ14296 549 aaKnown RBP17.55■□□□□ 0.4
USB1-213ENST00000566292 INPP5JQ15735 1006 aaPredicted RBP17.55■□□□□ 0.4
USB1-213ENST00000566292 RNF187Q5TA31 235 aaPredicted RBP17.55■□□□□ 0.4
USB1-213ENST00000566292 VWA5B1Q5TIE3 1220 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 CENPUQ71F23 418 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 OVCH1Q7RTY7 1134 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 GALNT16Q8N428 558 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 DTWD1Q8N5C7 304 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 OR2L3Q8NG85 312 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 OR2A1Q8NGT9 310 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 FKBP10Q96AY3 582 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 FOPNLQ96NB1 174 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 TCF12Q99081 682 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 SELENOSQ9BQE4 189 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 C5AR2Q9P296 337 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 VPS4AQ9UN37 437 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 MRFAP1Q9Y605 127 aa17.55■□□□□ 0.4
USB1-213ENST00000566292 SPTBN1Q01082 2364 aaKnown RBP17.54■□□□□ 0.4
USB1-213ENST00000566292 FITM1A5D6W6 292 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 H3BMM5 538 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 MED26O95402 600 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 KRT14P02533 472 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 ESR1P03372 595 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 F7P08709 466 aaPredicted RBP17.54■□□□□ 0.4
USB1-213ENST00000566292 ATP5DP30049 168 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 VSX2P58304 361 aaPredicted RBP17.54■□□□□ 0.4
USB1-213ENST00000566292 GRM7Q14831 915 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 MYBPC3Q14896 1274 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 CYP2A13Q16696 494 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 ACSBG2Q5FVE4 666 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.54■□□□□ 0.4
USB1-213ENST00000566292 TCTE1Q5JU00 501 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 FRMPD2BQ6IN97 320 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 CILP2Q8IUL8 1156 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 SPNS2Q8IVW8 549 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 RASGEF1CQ8N431 466 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 CLEC1AQ8NC01 280 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 PNPLA2Q96AD5 504 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 SPSB2Q99619 263 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 ZNF552Q9H707 407 aaPredicted RBP17.54■□□□□ 0.4
USB1-213ENST00000566292 SPATA7Q9P0W8 599 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 NBPF19A0A087WUL8 3843 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 ICE1Q9Y2F5 2266 aa17.54■□□□□ 0.4
USB1-213ENST00000566292 HIVEP3Q5T1R4 2406 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 LOC105369274A0A096LPK9 316 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 LOC102723532A0A0G2JNH3 316 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 ARHGEF33A8MVX0 844 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 AGPSO00116 658 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 IGHEP01854 428 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 ALBP02768 609 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 ERGP11308 486 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 PKMP14618 531 aaKnown RBP17.53■□□□□ 0.4
USB1-213ENST00000566292 CHRM3P20309 590 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 SOX8P57073 446 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 SARNPP82979 210 aaKnown RBP17.53■□□□□ 0.4
USB1-213ENST00000566292 NKG7Q16617 165 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 WASHC2DQ5SRD0 308 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 YOD1Q5VVQ6 348 aaPredicted RBP17.53■□□□□ 0.4
USB1-213ENST00000566292 ARMC3Q5W041 872 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 NEPROQ6NW34 567 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 RNF44Q7L0R7 432 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 OR4N4Q8N0Y3 316 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 RAB42Q8N4Z0 105 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 METTL27Q8N6F8 245 aaPredicted RBP17.53■□□□□ 0.4
USB1-213ENST00000566292 TTC29Q8NA56 475 aaPredicted RBP17.53■□□□□ 0.4
USB1-213ENST00000566292 MAGEC3Q8TD91 643 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 MS4A14Q96JA4 679 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 PSMG3-AS1Q96PY0 264 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 SLC30A3Q99726 388 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 SLC26A1Q9H2B4 701 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 WDR54Q9H977 334 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 SLAMF7Q9NQ25 335 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 CTSFQ9UBX1 484 aa17.53■□□□□ 0.4
USB1-213ENST00000566292 A0A0J9YVX5 310 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 FAM237BA0A1B0GVD1 139 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 BLACEA4D250 179 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 SOCS6O14544 535 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 PFDN6O15212 129 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 SRPX2O60687 465 aaPredicted RBP17.52■□□□□ 0.4
USB1-213ENST00000566292 PSIP1O75475 530 aaKnown RBP17.52■□□□□ 0.4
USB1-213ENST00000566292 PIM1P11309 404 aaPredicted RBP17.52■□□□□ 0.4
USB1-213ENST00000566292 PAMP19021 973 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 MMP11P24347 488 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 OR1D4P47884 311 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 KLHL38Q2WGJ6 581 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 PLEKHN1Q494U1 663 aaPredicted RBP17.52■□□□□ 0.4
USB1-213ENST00000566292 ANKRD20A4Q4UJ75 823 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 CASC4Q6P4E1 433 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 OR9A1PQ8NGU1 263 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 MAGOHBQ96A72 148 aaKnown RBP17.52■□□□□ 0.4
USB1-213ENST00000566292 ZNF669Q96BR6 464 aaPredicted RBP17.52■□□□□ 0.4
USB1-213ENST00000566292 ACAT2Q9BWD1 397 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 SLC6A20Q9NP91 592 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 NEU2Q9Y3R4 380 aa17.52■□□□□ 0.4
USB1-213ENST00000566292 OR2A25A4D2G3 310 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 GOLGA8MH3BSY2 632 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 ALOX12BO75342 701 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 MLNP12872 115 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 CLCN7P51798 805 aa17.51■□□□□ 0.39
USB1-213ENST00000566292 DHX34Q14147 1143 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms