RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 PDIK1LQ8N165 341 aa18.21■□□□□ 0.51
SPSB3-207ENST00000565550 RBMXL3Q8N7X1 1067 aaKnown RBP18.21■□□□□ 0.51
SPSB3-207ENST00000565550 Q8NA96 180 aa18.21■□□□□ 0.51
SPSB3-207ENST00000565550 BIRC8Q96P09 236 aa18.21■□□□□ 0.51
SPSB3-207ENST00000565550 TTC1Q99614 292 aa18.21■□□□□ 0.51
SPSB3-207ENST00000565550 C17orf62Q9BQA9 187 aa18.21■□□□□ 0.51
SPSB3-207ENST00000565550 CHRNA10Q9GZZ6 450 aa18.21■□□□□ 0.51
SPSB3-207ENST00000565550 SLAMF7Q9NQ25 335 aa18.21■□□□□ 0.51
SPSB3-207ENST00000565550 IARS2Q9NSE4 1012 aaKnown RBP18.21■□□□□ 0.51
SPSB3-207ENST00000565550 GPN3Q9UHW5 284 aaPredicted RBP18.21■□□□□ 0.51
SPSB3-207ENST00000565550 ISM1B1AKI9 464 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 KIF2AO00139 706 aaPredicted RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 S1PR4O95977 384 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 OGNP20774 298 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 ARL4CP56559 192 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 DCDP81605 110 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 PLOD1Q02809 727 aaPredicted RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 THOC5Q13769 683 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 MRNIPQ6NTE8 343 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 C8orf74Q6P047 294 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 TRMT10BQ6PF06 316 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 ZDHHC24Q6UX98 284 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 HPS6Q86YV9 775 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 DNAJC22Q8N4W6 341 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 ZNF655Q8N720 491 aaPredicted RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 KIF18AQ8NI77 898 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 GBP5Q96PP8 586 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 SMAD5Q99717 465 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 WHRNQ9P202 907 aa18.2■□□□□ 0.5
SPSB3-207ENST00000565550 DHCR7Q9UBM7 475 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 TSR3Q9UJK0 312 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 PTRH2Q9Y3E5 179 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 SNRNP200O75643 2136 aaKnown RBP18.2■□□□□ 0.5
SPSB3-207ENST00000565550 ZSCAN9O15535 394 aaPredicted RBP18.19■□□□□ 0.5
SPSB3-207ENST00000565550 PEBP1P30086 187 aaKnown RBP18.19■□□□□ 0.5
SPSB3-207ENST00000565550 SLC9A5Q14940 896 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 KYNUQ16719 465 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 SLC5A12Q1EHB4 618 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 SPANXN3Q5MJ09 141 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 ARMC3Q5W041 872 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 SLC6A19Q695T7 634 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 PTRHD1Q6GMV3 140 aaKnown RBP18.19■□□□□ 0.5
SPSB3-207ENST00000565550 CAPN12Q6ZSI9 719 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 MRGPREQ86SM8 312 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 SDCCAG8Q86SQ7 713 aaPredicted RBP18.19■□□□□ 0.5
SPSB3-207ENST00000565550 FAM20CQ8IXL6 584 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 LRRN4CLQ8ND94 238 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 FBXO36Q8NEA4 188 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 PROKR1Q8TCW9 393 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 PCSK5Q92824 1860 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 PNPLA2Q96AD5 504 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 IRAK4Q9NWZ3 460 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 IFT80Q9P2H3 777 aaPredicted RBP18.19■□□□□ 0.5
SPSB3-207ENST00000565550 ZC3H7BQ9UGR2 993 aaKnown RBP18.19■□□□□ 0.5
SPSB3-207ENST00000565550 CDYLQ9Y232 598 aa18.19■□□□□ 0.5
SPSB3-207ENST00000565550 UTP11Q9Y3A2 253 aaKnown RBP18.19■□□□□ 0.5
SPSB3-207ENST00000565550 E7ESA3 106 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 KDM1AO60341 852 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 RPS3P23396 243 aaKnown RBP eCLIP18.18■□□□□ 0.5
SPSB3-207ENST00000565550 PPARGP37231 505 aaPredicted RBP18.18■□□□□ 0.5
SPSB3-207ENST00000565550 FOLR3P41439 243 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 PLTPP55058 493 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 FOXL2P58012 376 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 HSPA14Q0VDF9 509 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 CALCOCO2Q13137 446 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 KIR2DS3Q14952 304 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 ZNF549Q6P9A3 640 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 TLDC1Q6P9B6 456 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 CNSTQ6PJW8 725 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 ZBED8Q8IZ13 594 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 FBXO25Q8TCJ0 367 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 FER1L6-AS2Q96M78 137 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 IP6K3Q96PC2 410 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 CARD6Q9BX69 1037 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 TXLNGQ9NUQ3 528 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 MAP10Q9P2G4 905 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 NDOR1Q9UHB4 597 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 DMGDHQ9UI17 866 aaKnown RBP18.18■□□□□ 0.5
SPSB3-207ENST00000565550 GNPTGQ9UJJ9 305 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 PLCL2Q9UPR0 1127 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 KLHL20Q9Y2M5 609 aa18.18■□□□□ 0.5
SPSB3-207ENST00000565550 USP9YO00507 2555 aaPredicted RBP18.18■□□□□ 0.5
SPSB3-207ENST00000565550 USP9XQ93008 2570 aaPredicted RBP18.18■□□□□ 0.5
SPSB3-207ENST00000565550 RP1L1Q8IWN7 2480 aaPredicted RBP18.17■□□□□ 0.5
SPSB3-207ENST00000565550 TCP11X1B4DZS4 312 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 F8W8V4 182 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 SMAPO00193 183 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 PEX12O00623 359 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 CNOT3O75175 753 aaKnown RBP18.17■□□□□ 0.5
SPSB3-207ENST00000565550 SEMA7AO75326 666 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 PIAS1O75925 651 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 HAUS5O94927 633 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 TUBB4AP04350 444 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 CD63P08962 238 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 AOAHP28039 575 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 CARSP49589 748 aaKnown RBP18.17■□□□□ 0.5
SPSB3-207ENST00000565550 NKAIN1Q4KMZ8 207 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 C4orf17Q53FE4 359 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 DCAF10Q5QP82 559 aa18.17■□□□□ 0.5
SPSB3-207ENST00000565550 STEAP4Q687X5 459 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms