RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 GOLGA6L9A6NEM1 432 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 RNF212BA8MTL3 300 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 A8MUI8 341 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF487B1APH4 448 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 RAF1P04049 648 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ZGLP1P0C6A0 271 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 COX6A1P12074 109 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 UGT2B7P16662 529 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 SHMT2P34897 504 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 PTGS2P35354 604 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 HMGCLP35914 325 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 GCGRP47871 477 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 OR1D4P47884 311 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 EMP2P54851 167 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 GRM7Q14831 915 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ATP13A4Q4VNC1 1196 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ZC3H12BQ5HYM0 836 aaKnown RBP8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 TCTE1Q5JU00 501 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 SHEQ5VZ18 495 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 C11orf63Q6NUN7 778 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ARSKQ6UWY0 536 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ACAD11Q709F0 780 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 CHSY3Q70JA7 882 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 DAAM2Q86T65 1068 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 CDC20BQ86Y33 519 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ZZZ3Q8IYH5 903 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 HORMAD2Q8N7B1 307 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 TMEM178AQ8NBL3 297 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 CCNYQ8ND76 341 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 FAM71BQ8TC56 605 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF354BQ96LW1 612 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 OR2A14Q96R47 310 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 TRIB3Q96RU7 358 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 GPATCH1Q9BRR8 931 aaKnown RBP8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 TRIM51Q9BSJ1 452 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 TRIM7Q9C029 511 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 LACRTQ9GZZ8 138 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 TRABDQ9H4I3 376 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF304Q9HCX3 659 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 KLHL1Q9NR64 748 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 RIC8BQ9NVN3 520 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 ASB1Q9Y576 335 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 CCDC88CQ9P219 2028 aa8.62□□□□□ -1.03
VPS9D1-205ENST00000565452 IGHV1-45A0A0A0MS14 117 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 GLYATL1P3A0A0U1RQE8 302 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 MIF4GDA9UHW6 222 aaKnown RBP8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 RASGRF2O14827 1237 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 AURKAO14965 403 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNHIT1O43257 154 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 ARHGEF9O43307 516 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 PSTPIP1O43586 416 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 SPOPO43791 374 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 RARAP10276 462 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 ITGAMP11215 1152 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 MX2P20592 715 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 MSNP26038 577 aaKnown RBP8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 PEX19P40855 299 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 CETN2P41208 172 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 KIR2DL3P43628 341 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 SLC25A11Q02978 314 aaKnown RBP8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 KRT81Q14533 505 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 BCL7AQ4VC05 210 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 ODF2Q5BJF6 829 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 KDELC1Q6UW63 502 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 UNC5AQ6ZN44 842 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 NEK10Q6ZWH5 1172 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 NT5DC3Q86UY8 548 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 PAQR7Q86WK9 346 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 SIAH3Q8IW03 269 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 PRSS58Q8IYP2 241 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 TTC29Q8NA56 475 aaPredicted RBP8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 SIMC1Q8NDZ2 872 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 TRIM58Q8NG06 486 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 FAM57AQ8TBR7 257 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 HM13Q8TCT9 377 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 ZNF398Q8TD17 642 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 TFGQ92734 400 aaPredicted RBP8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 DCUN1D1Q96GG9 259 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 BTBD6Q96KE9 485 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 NRTNQ99748 197 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 MESP1Q9BRJ9 268 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 UTP23Q9BRU9 249 aaKnown RBP8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 PCDH18Q9HCL0 1135 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 OR6C2Q9NZP2 312 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 AMFRQ9UKV5 643 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 PPP2R2CQ9Y2T4 447 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 DUSP10Q9Y6W6 482 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 MAU2Q9Y6X3 613 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 HIVEP2P31629 2446 aa8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 INTS1Q8N201 2190 aaKnown RBP8.61□□□□□ -1.03
VPS9D1-205ENST00000565452 A0A1W2PQ72 361 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 ISM1B1AKI9 464 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 SUN1O94901 812 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 NDST3O95803 873 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 TPOP07202 933 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 HEXBP07686 556 aa8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 CHRM5P08912 532 aaPredicted RBP8.6□□□□□ -1.03
VPS9D1-205ENST00000565452 RALBP11234 206 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms