RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CCT5P48643 541 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 CXADRP78310 365 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 KIR2DS3Q14952 304 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 CCSMST1Q4G0I0 132 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 TMEM71Q6P5X7 295 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 USP53Q70EK8 1073 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 RAB11FIP2Q7L804 512 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 TRABD2AQ86V40 505 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 SLITRK4Q8IW52 837 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 TCAIMQ8N3R3 496 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 FBXO39Q8N4B4 442 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 NCSTNQ92542 709 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 ALKBH8Q96BT7 664 aaKnown RBP25.07■■□□□ 1.6
NME3-208ENST00000565379 PTERQ96BW5 349 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 GPR78Q96P69 363 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 CD180Q99467 661 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 NUDT22Q9BRQ3 303 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 TWSG1Q9GZX9 223 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 ZMYND15Q9H091 742 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 OGFRQ9NZT2 677 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 PLAGL1Q9UM63 463 aa25.07■■□□□ 1.6
NME3-208ENST00000565379 TMX2-CTNND1H3BSU7 103 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 SLC16A8O95907 504 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 TYRP1P17643 537 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 ITIH1P19827 911 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 CCKBRP32239 447 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 ETV5P41161 510 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 PNLIPRP1P54315 467 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 ZFP36L1Q07352 338 aaKnown RBP25.06■■□□□ 1.6
NME3-208ENST00000565379 TGFBIQ15582 683 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 NKAIN2Q5VXU1 208 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 SH2D5Q6ZV89 423 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 CARFQ8N187 725 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 OR4D9Q8NGE8 314 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 JPH3Q8WXH2 748 aaPredicted RBP25.06■■□□□ 1.6
NME3-208ENST00000565379 SMPDL3AQ92484 453 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 FBXL8Q96CD0 374 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 MRPL57Q9BQC6 102 aaKnown RBP25.06■■□□□ 1.6
NME3-208ENST00000565379 XKR8Q9H6D3 395 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 ALG9Q9H6U8 611 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 PISDQ9UG56 409 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 TMCO1Q9UM00 188 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 LOXL2Q9Y4K0 774 aa25.06■■□□□ 1.6
NME3-208ENST00000565379 PIPSLA2A3N6 862 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 GLRA3O75311 464 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 FKBP9O95302 570 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 S100BP04271 92 aaPredicted RBP25.05■■□□□ 1.6
NME3-208ENST00000565379 CHRM5P08912 532 aaPredicted RBP25.05■■□□□ 1.6
NME3-208ENST00000565379 KRT4P19013 534 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 CCND1P24385 295 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 SLC18A2Q05940 514 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 OR4D1Q15615 310 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 ZNF574Q6ZN55 896 aaPredicted RBP25.05■■□□□ 1.6
NME3-208ENST00000565379 SYTL1Q8IYJ3 562 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 ADGRF3Q8IZF5 1079 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 PLD6Q8N2A8 252 aaKnown RBP25.05■■□□□ 1.6
NME3-208ENST00000565379 DENND1AQ8TEH3 1009 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 ZNF480Q8WV37 535 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 RSC1A1Q92681 617 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 MKS1Q9NXB0 559 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 NUDT4Q9NZJ9 180 aa25.05■■□□□ 1.6
NME3-208ENST00000565379 STOX2Q9P2F5 926 aaPredicted RBP25.05■■□□□ 1.6
NME3-208ENST00000565379 MN1Q10571 1320 aaPredicted RBP25.05■■□□□ 1.6
NME3-208ENST00000565379 GOLGA8RI6L899 631 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 BTN3A3O00478 584 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 TOX3O15405 576 aaPredicted RBP25.04■■□□□ 1.6
NME3-208ENST00000565379 C1QL1O75973 258 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 C9P02748 559 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 IMPA1P29218 277 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 C16orf72Q14CZ0 275 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 TECRLQ5HYJ1 363 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 PHF19Q5T6S3 580 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 BROXQ5VW32 411 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 SULT1C3Q6IMI6 304 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 SCYL1Q96KG9 808 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 TMEM74Q96NL1 305 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 SMC6Q96SB8 1091 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 ATOH8Q96SQ7 321 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 EGFL8Q99944 293 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 UNKQ9C0B0 810 aaKnown RBP25.04■■□□□ 1.6
NME3-208ENST00000565379 STRADBQ9C0K7 418 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 PCBD2Q9H0N5 130 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 MRPL46Q9H2W6 279 aaKnown RBP25.04■■□□□ 1.6
NME3-208ENST00000565379 ACTR10Q9NZ32 417 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 PDP2Q9P2J9 529 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 GRID1Q9ULK0 1009 aa25.04■■□□□ 1.6
NME3-208ENST00000565379 CFAP46Q8IYW2 2715 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 GSAPA4D1B5 854 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 COPEO14579 308 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 CAPN5O15484 640 aaPredicted RBP25.03■■□□□ 1.6
NME3-208ENST00000565379 GUCA1CO95843 209 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 POLR2CP19387 275 aaPredicted RBP25.03■■□□□ 1.6
NME3-208ENST00000565379 SLC5A2P31639 672 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 CSF2RBP32927 897 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 CRHR1P34998 444 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 GMPRP36959 345 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 GLRBP48167 497 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 UCNP55089 124 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 CFHR1Q03591 330 aa25.03■■□□□ 1.6
NME3-208ENST00000565379 TRA2AQ13595 282 aaKnown RBP eCLIP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms