RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CDH4P55283 916 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PITPNAQ00169 270 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 GRIK3Q13003 919 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MRPL49Q13405 166 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 PGM2L1Q6PCE3 622 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 C16orf87Q6PH81 154 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ADGRD1Q6QNK2 874 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CYP20A1Q6UW02 462 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 USP30Q70CQ3 517 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 TMEM25Q86YD3 366 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZSCAN1Q8NBB4 408 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 LRRC20Q8TCA0 184 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PLD4Q96BZ4 506 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 TEX37Q96LM6 180 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CIPCQ9C0C6 399 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SH3BGRL3Q9H299 93 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 NUFIP1Q9UHK0 495 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 FBXL3Q9UKT7 428 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 DICER1Q9UPY3 1922 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 BDP1A6H8Y1 2624 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 INPPL1O15357 1258 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 TYROBPO43914 113 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SDC2P34741 201 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 TAGLN2P37802 199 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 GEMP55040 296 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 RGS1Q08116 209 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SKIV2LQ15477 1246 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 CLPPQ16740 277 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 TPGS2Q68CL5 300 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SPESP1Q6UW49 350 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 BNC2Q6ZN30 1099 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 MEX3DQ86XN8 651 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 CRIPAKQ8N1N5 446 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 FAM98AQ8NCA5 519 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 HNRNPABQ99729 332 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZFP14Q9HCL3 533 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 A0A0U1RQF3 1178 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 B2RBV5 119 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 KIAA0355O15063 1070 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MAGEB3O15480 346 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 GNSP15586 552 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 GSTM3P21266 225 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CD70P32970 193 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 USP41Q3LFD5 358 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 DOK6Q6PKX4 331 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SERINC5Q86VE9 423 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZSWIM9Q86XI8 627 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZNF761Q86XN6 746 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 DDIASQ8IXT1 998 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ITFG1Q8TB96 612 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 EEF1AKMT1Q8WVE0 214 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ARL5BQ96KC2 179 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 TRIB3Q96RU7 358 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 POLR1EQ9GZS1 481 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 CNGB3Q9NQW8 809 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 DUSP12Q9UNI6 340 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 USP15Q9Y4E8 981 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 PRSS21Q9Y6M0 314 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 RNF103-CHMP3A0A140T963 221 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MTMR11A4FU01 709 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SERPINB7O75635 380 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 DIRAS1O95057 198 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 AK1P00568 194 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PENKP01210 267 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 CSKP41240 450 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 GABRB2P47870 512 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 POLE2P56282 527 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 STXBP1P61764 594 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 EEF1A1P68104 462 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 EEF1A2Q05639 463 aaKnown RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZNF268Q14587 947 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 PRKD1Q15139 912 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 PFKFB4Q16877 469 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 EEF1A1P5Q5VTE0 462 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 PKN3Q6P5Z2 889 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CASP12Q6UXS9 341 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 CYHR1Q6ZMK1 362 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ALDH16A1Q8IZ83 802 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 STAG3L4Q8TBR4 150 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 TM9SF4Q92544 642 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 C12orf66Q96MD2 445 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 ZNF717Q9BY31 904 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 EBF3Q9H4W6 596 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 DENND2DQ9H6A0 471 aaPredicted RBP3.28□□□□□ -1.88
CHD9-213ENST00000564845 RXFP1Q9HBX9 757 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 MARCH2Q9P0N8 246 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 SRRDQ9UH36 339 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 USP3Q9Y6I4 520 aa3.28□□□□□ -1.88
CHD9-213ENST00000564845 A0A096LPK6 155 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 MBLAC1A4D2B0 266 aaPredicted RBP3.28□□□□□ -1.89
CHD9-213ENST00000564845 KCNU1A8MYU2 1149 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 LILRB3O75022 631 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 SNCGO76070 127 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ZNF432O94892 652 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ME2P23368 584 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 SLC6A6P31641 620 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ARCN1P48444 511 aaKnown RBP3.28□□□□□ -1.89
CHD9-213ENST00000564845 ARMC4Q5T2S8 1044 aa3.28□□□□□ -1.89
CHD9-213ENST00000564845 ASTLQ6HA08 431 aaPredicted RBP3.28□□□□□ -1.89
CHD9-213ENST00000564845 TMEM214Q6NUQ4 689 aaKnown RBP3.28□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms