RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 MDM1Q8TC05 714 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ZNF398Q8TD17 642 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 MTBPQ96DY7 904 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ZNF778Q96MU6 729 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 MCCC1Q96RQ3 725 aaPredicted RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 PAFAH2Q99487 392 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 CPNE1Q99829 537 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 CDH19Q9H159 772 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 CCDC68Q9H2F9 335 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 MFSD1Q9H3U5 465 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 FAM83DQ9H4H8 585 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ASB8Q9H765 288 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SYNPO2LQ9H987 977 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TMBIM4Q9HC24 238 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 LTB4R2Q9NPC1 389 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ZDHHC4Q9NPG8 344 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TREX1Q9NSU2 369 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 INTS10Q9NVR2 710 aaKnown RBP4.56□□□□□ -1.68
CDR2-203ENST00000563573 FBXL12Q9NXK8 326 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 IL17CQ9P0M4 197 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SLC2A6Q9UGQ3 507 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TBK1Q9UHD2 729 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 ZNF180Q9UJW8 692 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 SARDHQ9UL12 918 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 NFS1Q9Y697 457 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 COX11Q9Y6N1 276 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 LRRK1Q38SD2 2015 aa4.56□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3DA0A087WVF3 549 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3IA0A087WXS9 549 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3EA0A087X179 549 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3KA0A087X1G2 549 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 GLYATL1P3A0A0U1RQE8 302 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 A0A1W2PQF6 199 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TCRBV21S2A2A0A5A6 115 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 CCDC162PA2VCL2 907 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3FA6NER0 549 aaPredicted RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 NPIPB15A6NHN6 443 aaPredicted RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 LRRC72A6NJI9 287 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 CXorf49A8MYA2 514 aaPredicted RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3LB9A6J9 549 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 GOLGA8TH3BQL2 631 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 K7ESF4 209 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 AGPSO00116 658 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 MID1O15344 667 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TMEM127O75204 238 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 ZNF217O75362 1048 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TM7SF2O76062 418 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 SRP72O76094 671 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 PRKD3O94806 890 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 GOT2P00505 430 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 SLC4A1P02730 911 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 AHSGP02765 367 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 PRKCGP05129 697 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3HP0C7X1 549 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 CHRNB1P11230 501 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 RALBP11234 206 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 ZNF7P17097 686 aaPredicted RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 ITGALP20701 1170 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 PSMA3P25788 255 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 GP5P40197 560 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 P2RY2P41231 377 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 PTGER3P43115 390 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 MAGEA9P43362 315 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 SLCO1A2P46721 670 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 RPS9P46781 194 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 LEPRP48357 1165 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 ARCN1P48444 511 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 CD151P48509 253 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 CCT5P48643 541 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 SPINT3P49223 89 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 ZNF140P52738 457 aaPredicted RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 COPAP53621 1224 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 SEC24CP53992 1094 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 ELLP55199 621 aaPredicted RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 CLRN1P58418 232 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 RPS21P63220 83 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 ACVR1Q04771 509 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 CACNG1Q06432 222 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 ZNF844Q08AG5 666 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 CNTN1Q12860 1018 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 CTBP1Q13363 440 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 PDCD1Q15116 288 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TMED2Q15363 201 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 CDKN3Q16667 212 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 ZNF284Q2VY69 593 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 POM121L1PQ3SYA9 428 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 PDCD4Q53EL6 469 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 SETMARQ53H47 684 aaPredicted RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 LRRC66Q68CR7 880 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3GQ6DHY5 549 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 TBC1D3CQ6IPX1 549 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 UGT3A1Q6NUS8 523 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 NEK5Q6P3R8 708 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 KIAA1324Q6UXG2 1013 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 PACS1Q6VY07 963 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 RAPH1Q70E73 1250 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 MARK2Q7KZI7 788 aaKnown RBP4.55□□□□□ -1.68
CDR2-203ENST00000563573 SYT13Q7L8C5 426 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 SNX20Q7Z614 316 aa4.55□□□□□ -1.68
CDR2-203ENST00000563573 GALNT7Q86SF2 657 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms