RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 LINC00032P0C843 101 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 FDX1P10109 184 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 FGF3P11487 239 aaPredicted RBP6.13□□□□□ -1.43
CLK3-212ENST00000563418 GRK4P32298 578 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 KCNJ11Q14654 390 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 QSOX2Q6ZRP7 698 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 ASB18Q6ZVZ8 466 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 CYS1Q717R9 158 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 CMC1Q7Z7K0 106 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 C4orf32Q8N8J7 132 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 ZBTB44Q8NCP5 570 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 CHFRQ96EP1 664 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 PANX1Q96RD7 426 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 ADAM2Q99965 735 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 SPNS1Q9H2V7 528 aa6.13□□□□□ -1.43
CLK3-212ENST00000563418 RPH3AQ9Y2J0 694 aaPredicted RBP6.13□□□□□ -1.43
CLK3-212ENST00000563418 H0YIN7 160 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 IFNW1P05000 195 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 NCK1P16333 377 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 CXCR2P25025 360 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ADORA2BP29275 332 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ADAM8P78325 824 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 PTPN11Q06124 597 aaPredicted RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 SPATA22Q8NHS9 363 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 DNAJB3Q8WWF6 145 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 KCNJ9Q92806 393 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 RPRD1AQ96P16 312 aaPredicted RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 SEPT5Q99719 369 aaPredicted RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 TRPV4Q9HBA0 871 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ZBTB20Q9HC78 741 aaPredicted RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 MGAT4CQ9UBM8 478 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 AFF4Q9UHB7 1163 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 UNCXA6NJT0 531 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 PHYHO14832 338 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 KIAA0355O15063 1070 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 FAM155BO75949 473 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 CSN2P05814 226 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 VAMP1P23763 118 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ADH6P28332 368 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 GPR143P51810 404 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 TEKQ02763 1124 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 HEPACAMQ14CZ8 416 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ZCCHC12Q6PEW1 402 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 SLC35B2Q8TB61 432 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 SETD7Q8WTS6 366 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 THRSPQ92748 146 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 RNF32Q9H0A6 362 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 CKLFQ9UBR5 152 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 FNDC3AQ9Y2H6 1198 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 MYH14Q7Z406 1995 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 A0A1B0GVC2 190 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ZNF35P13682 527 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 NNMTP40261 264 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 HSPA7P48741 367 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ACOT2P49753 483 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 EMP3P54852 163 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 NTRK2Q16620 822 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ADGRG3Q86Y34 549 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 TRIM43Q96BQ3 446 aaPredicted RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 SMARCD1Q96GM5 515 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ISCA1Q9BUE6 129 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 C12orf65Q9H3J6 166 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 SEMA3GQ9NS98 782 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 TMEM184CQ9NVA4 438 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 HSFX1Q9UBD0 423 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 CLCA3PQ9Y6N3 262 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 AP1M2Q9Y6Q5 423 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 EEDO75530 441 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 MT-ND2P03891 347 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 CALCRP30988 508 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 DPP6P42658 865 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 B2MP61769 119 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 BTG1P62324 171 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 KRBOX4Q5JUW0 171 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 GPR153Q6NV75 609 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 KLHL24Q6TFL4 600 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 TRIM46Q7Z4K8 759 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 SYT12Q8IV01 421 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 NSUN4Q96CB9 384 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 DCLRE1CQ96SD1 692 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 CDCA7Q9BWT1 371 aaPredicted RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 TRIM36Q9NQ86 728 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 AAASQ9NRG9 546 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 TJP2Q9UDY2 1190 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ZNF225Q9UK10 706 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 EXOSC1Q9Y3B2 195 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 SSX4O60224 188 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 EPB42P16452 691 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 PLK1P53350 603 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 DSG2Q14126 1118 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 GPR68Q15743 365 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 PLEKHN1Q494U1 663 aaPredicted RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 SYTL3Q4VX76 610 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 VARS2Q5ST30 1063 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 ZNF567Q8N184 647 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 ZNF639Q9UID6 485 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 NOCTQ9UK39 431 aaKnown RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 FBXO5Q9UKT4 447 aa6.12□□□□□ -1.43
CLK3-212ENST00000563418 SPIN1Q9Y657 262 aaPredicted RBP6.12□□□□□ -1.43
CLK3-212ENST00000563418 LAMA4Q16363 1823 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms