RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ZNF148Q9UQR1 794 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 TCAF1Q9Y4C2 921 aa12.43□□□□□ -0.42
SF3B3-202ENST00000562722 HIVEP3Q5T1R4 2406 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 A0A0J9YVX5 310 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 HYKKA2RU49 373 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 MAP2K7O14733 419 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 PRMT5O14744 637 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-202ENST00000562722 SUN1O94901 812 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 APRTP07741 180 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 ERVK-10P10266 1014 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 EDN3P14138 238 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 ACPPP15309 386 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 PSMB5P28074 263 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 STIP1P31948 543 aaKnown RBP12.42□□□□□ -0.42
SF3B3-202ENST00000562722 CARSP49589 748 aaKnown RBP12.42□□□□□ -0.42
SF3B3-202ENST00000562722 TTPAP49638 278 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 ZNF75DP51815 510 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 KIF5AQ12840 1032 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 SEL1L2Q5TEA6 688 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 B3GNTL1Q67FW5 361 aaPredicted RBP12.42□□□□□ -0.42
SF3B3-202ENST00000562722 CNSTQ6PJW8 725 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 ISLR2Q6UXK2 745 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 OTOAQ7RTW8 1153 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 DTWD1Q8N5C7 304 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 CCDC89Q8N998 374 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 OR11G2Q8NGC1 345 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 FAR1Q8WVX9 515 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 ZUFSPQ96AP4 578 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 RAD51AP1Q96B01 352 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 MIEF2Q96C03 454 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 BARD1Q99728 777 aaKnown RBP12.42□□□□□ -0.42
SF3B3-202ENST00000562722 YIPF2Q9BWQ6 316 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 ZNF304Q9HCX3 659 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 ZC3H7BQ9UGR2 993 aaKnown RBP12.42□□□□□ -0.42
SF3B3-202ENST00000562722 RIMKLBQ9ULI2 386 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 RUVBL2Q9Y230 463 aaKnown RBP12.42□□□□□ -0.42
SF3B3-202ENST00000562722 MRFAP1Q9Y605 127 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 DOPEY1Q5JWR5 2465 aa12.42□□□□□ -0.42
SF3B3-202ENST00000562722 ARHGAP10A1A4S6 786 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 FITM1A5D6W6 292 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 TARM1B6A8C7 271 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 CD3EAPO15446 510 aaKnown RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 LIASO43766 372 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 SRPX2O60687 465 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 CTSVO60911 334 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 NDUFS3O75489 264 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 SLCO2B1O94956 709 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 FKBP9O95302 570 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 ONECUT2O95948 504 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 FBLP22087 321 aaKnown RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 SESN2P58004 480 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 ARG2P78540 354 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 ACVR1Q04771 509 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 KLC1Q07866 573 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 SNX1Q13596 522 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 TSTA3Q13630 321 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 FRMPD2BQ6IN97 320 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 IGFL2Q6UWQ7 119 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 PRUNE1Q86TP1 453 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 KBTBD2Q8IY47 623 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 OR1N1Q8NGS0 311 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 STT3BQ8TCJ2 826 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 CABS1Q96KC9 395 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 CHRAC1Q9NRG0 131 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 OLAHQ9NV23 265 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 CCDC88CQ9P219 2028 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 MARCH4Q9P2E8 410 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 STOX2Q9P2F5 926 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 ZNF282Q9UDV7 671 aaPredicted RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 C3orf18Q9UK00 162 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 NFS1Q9Y697 457 aa12.41□□□□□ -0.42
SF3B3-202ENST00000562722 PRRC2CQ9Y520 2896 aaKnown RBP12.41□□□□□ -0.42
SF3B3-202ENST00000562722 NSG1A0A0A6YYJ2 146 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 KRT87PA6NCN2 255 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 VSTM2BA6NLU5 285 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 E2F3O00716 465 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 KPNA5O15131 536 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 ZG16O60844 167 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 C1orf105O95561 183 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 HPP00738 406 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 ZGLP1P0C6A0 271 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 ETS1P14921 441 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 CCNFP41002 786 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 EIF3BP55884 814 aaKnown RBP12.4□□□□□ -0.42
SF3B3-202ENST00000562722 Q0VFX4 171 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 MFAP5Q13361 173 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 NAA30Q147X3 362 aaPredicted RBP12.4□□□□□ -0.42
SF3B3-202ENST00000562722 CCSMST1Q4G0I0 132 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 PCID2Q5JVF3 399 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 C1QL3Q5VWW1 255 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 PRMT9Q6P2P2 845 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 SRRM1Q8IYB3 904 aaKnown RBP12.4□□□□□ -0.42
SF3B3-202ENST00000562722 BCORP1Q8N888 145 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 CATSPER1Q8NEC5 780 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 OR2L3Q8NG85 312 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 MAGEC3Q8TD91 643 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 C1orf54Q8WWF1 131 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 PEX13Q92968 403 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 C8orf44Q96CB5 159 aa12.4□□□□□ -0.42
SF3B3-202ENST00000562722 ZNF285Q96NJ3 590 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms