RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 KIR2DS3Q14952 304 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 GPR33Q49SQ1 333 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 NEK10Q6ZWH5 1172 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 NLRP9Q7RTR0 991 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 CDKL3Q8IVW4 592 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 RCOR2Q8IZ40 523 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 ZNF295-AS1Q8N0V1 137 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 FAM71DQ8N9W8 422 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 TTC29Q8NA56 475 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 SKA2Q8WVK7 121 aaPredicted RBP11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 PSMF1Q92530 271 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 FAM136AQ96C01 138 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 MIEF2Q96C03 454 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 SPATA13Q96N96 652 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 ACAT2Q9BWD1 397 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 WDR54Q9H977 334 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 ABCF3Q9NUQ8 709 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 ANKRD10Q9NXR5 420 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 SUCOQ9UBS9 1254 aaKnown RBP11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 SEC14L3Q9UDX4 400 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 POLG2Q9UHN1 485 aa11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 AAR2Q9Y312 384 aaKnown RBP11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.15□□□□□ -0.62
NSMCE1-202ENST00000561960 NSG1A0A0A6YYJ2 146 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 A0A0U1RQJ8 604 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 DYTNA2CJ06 578 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 HYKKA2RU49 373 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 KLHL41O60662 606 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 MFAP3LO75121 409 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 HPP00738 406 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 FTH1P02794 183 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 CD63P08962 238 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 CD9P21926 228 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 FBLP22087 321 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 FOXN2P32314 431 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 ANP32AP39687 249 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 NSG1P42857 185 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 RAB28P51157 221 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 ARSFP54793 590 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 GDF10P55107 478 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 MAT1AQ00266 395 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 FASTKQ14296 549 aaKnown RBP11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 GRM7Q14831 915 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 C3AR1Q16581 482 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 HIBCHQ6NVY1 386 aaPredicted RBP11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 CNSTQ6PJW8 725 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 PRUNE1Q86TP1 453 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 KBTBD2Q8IY47 623 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 OR52K1Q8NGK4 314 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 HEXDCQ8WVB3 486 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 HDAC10Q969S8 669 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 RELTQ969Z4 430 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 CABS1Q96KC9 395 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 C10orf90Q96M02 699 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF778Q96MU6 729 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF304Q9HCX3 659 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 KLHL1Q9NR64 748 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 SEMA3GQ9NS98 782 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 TRPC4Q9UBN4 977 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 SLC39A10Q9ULF5 831 aa11.14□□□□□ -0.63
NSMCE1-202ENST00000561960 VSTM2BA6NLU5 285 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 PJA2O43164 708 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 STK10O94804 968 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 AP2A2O94973 939 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 GOT2P00505 430 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 F7P08709 466 aaPredicted RBP11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 OR56A5P0C7T3 313 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 SOX11P35716 441 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 KIR3DL1P43629 444 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 HSF1Q00613 529 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 OCA2Q04671 838 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF33BQ06732 778 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 ART3Q13508 389 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 HKDC1Q2TB90 917 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 BNC2Q6ZN30 1099 aaPredicted RBP11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 TMTC1Q8IUR5 882 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 ALS2CR12Q96Q35 445 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 MRM3Q9HC36 420 aaKnown RBP11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 HCFC1P51610 2035 aa11.13□□□□□ -0.63
NSMCE1-202ENST00000561960 A8MUI8 341 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 IDSB3KWA1 339 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 PRICKLE3O43900 615 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 SEC24DO94855 1032 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 RASAL1O95294 804 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 ALBP02768 609 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 PIM1P11309 404 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 GRIA1P42261 906 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 CA7P43166 264 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 MAGEA1P43355 309 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 ZNF630Q2M218 657 aaPredicted RBP11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 MFSD4BQ5TF39 518 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 SUSD1Q6UWL2 747 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 LANCL3Q6ZV70 420 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 SLC22A15Q8IZD6 547 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 OR13J1Q8NGT2 312 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 OR6P1Q8NGX9 317 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 OR2L8Q8NGY9 312 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 STYXQ8WUJ0 223 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 IQCDQ96DY2 449 aa11.12□□□□□ -0.63
NSMCE1-202ENST00000561960 TRIM56Q9BRZ2 755 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms