RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 MYOCQ99972 504 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 HAUS8Q9BT25 410 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 EFCAB11Q9BUY7 163 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 CARS2Q9HA77 564 aaKnown RBP16.59■□□□□ 0.25
HDDC3-206ENST00000561036 LRTM1Q9HBL6 345 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 WASH6PQ9NQA3 447 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 FARSBQ9NSD9 589 aaKnown RBP16.59■□□□□ 0.25
HDDC3-206ENST00000561036 C1orf109Q9NX04 203 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 MOSPD1Q9UJG1 213 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 PSMD13Q9UNM6 376 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 CYP8B1Q9UNU6 501 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 PCDHGA11Q9Y5H2 935 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 HEBP2Q9Y5Z4 205 aa16.59■□□□□ 0.25
HDDC3-206ENST00000561036 A0A088AWK7 358 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 C19orf67A6NJJ6 358 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 E7EQ34 232 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 NRP2O60462 931 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 SLC22A3O75751 556 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 CIB2O75838 187 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 IGHV4-34P06331 123 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 SLC2A4P14672 509 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 CD1EP15812 388 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 LAPTM5Q13571 262 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 GAS6Q14393 721 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 UAP1L1Q3KQV9 507 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 MMEL1Q495T6 779 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 C6orf163Q5TEZ5 329 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 ATG9BQ674R7 924 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 PGM2L1Q6PCE3 622 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 ENPP7Q6UWV6 458 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 NET1Q7Z628 596 aaPredicted RBP16.58■□□□□ 0.24
HDDC3-206ENST00000561036 DEFB107AQ8IZN7 70 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 PCYOX1LQ8NBM8 494 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 PPFIBP2Q8ND30 876 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 OR1E3Q8WZA6 343 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 CMTM7Q96FZ5 175 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 INSM2Q96T92 566 aaPredicted RBP16.58■□□□□ 0.24
HDDC3-206ENST00000561036 SERPINI1Q99574 410 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 RAB11FIP5Q9BXF6 653 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 ACPTQ9BZG2 426 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 PCED1AQ9H1Q7 454 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 CHRDQ9H2X0 955 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 OSGEPL1Q9H4B0 414 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 C6orf106Q9H6K1 298 aaPredicted RBP16.58■□□□□ 0.24
HDDC3-206ENST00000561036 BRF2Q9HAW0 419 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 TMED5Q9Y3A6 229 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 SZT2Q5T011 3432 aa16.58■□□□□ 0.24
HDDC3-206ENST00000561036 NUMA1Q14980 2115 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 DOCK9Q9BZ29 2069 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 FAM234BA2RU67 622 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 KDM1AO60341 852 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 C1GALT1C1LP0DN25 315 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 MAPK1P28482 360 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 THOP1P52888 689 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 TBL3Q12788 808 aaKnown RBP16.57■□□□□ 0.24
HDDC3-206ENST00000561036 RCAN2Q14206 197 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 TRMT5Q32P41 509 aaKnown RBP16.57■□□□□ 0.24
HDDC3-206ENST00000561036 RFTN2Q52LD8 501 aaPredicted RBP16.57■□□□□ 0.24
HDDC3-206ENST00000561036 PAGE2BQ5JRK9 111 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 PRAMEF14Q5SWL7 426 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 CACHD1Q5VU97 1274 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 IL23RQ5VWK5 629 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 PRAMEF13Q5VWM6 474 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 REP15Q6BDI9 236 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 CYP20A1Q6UW02 462 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 OR9I1Q8NGQ6 314 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 WDR20Q8TBZ3 569 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 SLC5A11Q8WWX8 675 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 SMPDL3AQ92484 453 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 UBE2E3Q969T4 207 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 CLDN23Q96B33 292 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 ROPN1LQ96C74 230 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 C12orf66Q96MD2 445 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 FERD3LQ96RJ6 166 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 MRPL40Q9NQ50 206 aaKnown RBP16.57■□□□□ 0.24
HDDC3-206ENST00000561036 TRNAU1APQ9NX07 287 aaKnown RBP16.57■□□□□ 0.24
HDDC3-206ENST00000561036 CIDEBQ9UHD4 219 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 PCOLCE2Q9UKZ9 415 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 KCNK6Q9Y257 313 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 WDR37Q9Y2I8 494 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 TDRKHQ9Y2W6 561 aaKnown RBP16.57■□□□□ 0.24
HDDC3-206ENST00000561036 TSC22D4Q9Y3Q8 395 aa16.57■□□□□ 0.24
HDDC3-206ENST00000561036 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.57■□□□□ 0.24
HDDC3-206ENST00000561036 FBP2O00757 339 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 MRASO14807 208 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 SEC22BO75396 215 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 ATP6V1G2O95670 118 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 PRPS2P11908 318 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 CD22P20273 847 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 JAK1P23458 1154 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 RPL10P27635 214 aaKnown RBP16.56■□□□□ 0.24
HDDC3-206ENST00000561036 KCNK10P57789 538 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 RPL38P63173 70 aaKnown RBP16.56■□□□□ 0.24
HDDC3-206ENST00000561036 HMGCS1Q01581 520 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 HIST2H2ACQ16777 129 aaPredicted RBP16.56■□□□□ 0.24
HDDC3-206ENST00000561036 TMEM31Q5JXX7 168 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 HIST2H2AA3Q6FI13 130 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 MED27Q6P2C8 311 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 NXPE4Q6UWF7 544 aa16.56■□□□□ 0.24
HDDC3-206ENST00000561036 ABRAXAS1Q6UWZ7 409 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms