RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 GOLGA8KD6RF30 607 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 H3BMM5 538 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 GOLGA8TH3BQL2 631 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 SRPX2O60687 465 aaPredicted RBP15.53■□□□□ 0.08
SNX1-213ENST00000561026 IPO13O94829 963 aaKnown RBP15.53■□□□□ 0.08
SNX1-213ENST00000561026 MATN4O95460 622 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 FMO4P31512 558 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 ADARP55265 1226 aaKnown RBP15.53■□□□□ 0.08
SNX1-213ENST00000561026 GBX1Q14549 363 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 NKG7Q16617 165 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 FAM214AQ32MH5 1076 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 RNF187Q5TA31 235 aaPredicted RBP15.53■□□□□ 0.08
SNX1-213ENST00000561026 CNSTQ6PJW8 725 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 COX15Q7KZN9 410 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 TRIM58Q8NG06 486 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 OR2L3Q8NG85 312 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 OR2A1Q8NGT9 310 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 MIPEPQ99797 713 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 SLC26A1Q9H2B4 701 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 IL1RAPL1Q9NZN1 696 aa15.53■□□□□ 0.08
SNX1-213ENST00000561026 ICE1Q9Y2F5 2266 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 A0A1W2PPV9 198 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 PFDN6O15212 129 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 NIPSNAP2O75323 286 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 ESR1P03372 595 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 PSMB5P28074 263 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 ATP5DP30049 168 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 CXCR5P32302 372 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 VSX2P58304 361 aaPredicted RBP15.52■□□□□ 0.08
SNX1-213ENST00000561026 AIMP2Q13155 320 aaKnown RBP15.52■□□□□ 0.08
SNX1-213ENST00000561026 WASHC2DQ5SRD0 308 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 ARMC3Q5W041 872 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 IQCKQ8N0W5 287 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 PRELID2Q8N945 189 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 TTC29Q8NA56 475 aaPredicted RBP15.52■□□□□ 0.08
SNX1-213ENST00000561026 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.52■□□□□ 0.08
SNX1-213ENST00000561026 SNRNP40Q96DI7 357 aaKnown RBP15.52■□□□□ 0.08
SNX1-213ENST00000561026 SPSB2Q99619 263 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 SPATA7Q9P0W8 599 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 MAP10Q9P2G4 905 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 CDC23Q9UJX2 597 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 FBXL4Q9UKA2 621 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 CRYL1Q9Y2S2 319 aa15.52■□□□□ 0.08
SNX1-213ENST00000561026 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.51■□□□□ 0.07
SNX1-213ENST00000561026 SEMA7AO75326 666 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 AVILO75366 819 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 CHRM3P20309 590 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 MAGEA6P43360 314 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 OR1D4P47884 311 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 SARNPP82979 210 aaKnown RBP15.51■□□□□ 0.07
SNX1-213ENST00000561026 MRPL49Q13405 166 aaKnown RBP15.51■□□□□ 0.07
SNX1-213ENST00000561026 KCNJ11Q14654 390 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 TRIP13Q15645 432 aaPredicted RBP15.51■□□□□ 0.07
SNX1-213ENST00000561026 KIAA0930Q6ICG6 404 aaPredicted RBP15.51■□□□□ 0.07
SNX1-213ENST00000561026 FRMPD2BQ6IN97 320 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 ZADH2Q8N4Q0 377 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 TM9SF4Q92544 642 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 FAM136AQ96C01 138 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 C19orf60Q96EN9 201 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 SLC29A3Q9BZD2 475 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 ZBTB20Q9HC78 741 aaPredicted RBP15.51■□□□□ 0.07
SNX1-213ENST00000561026 SLC6A20Q9NP91 592 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 GALPQ9UBC7 116 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 CTSFQ9UBX1 484 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 NXT1Q9UKK6 140 aaKnown RBP15.51■□□□□ 0.07
SNX1-213ENST00000561026 HS3ST3B1Q9Y662 390 aa15.51■□□□□ 0.07
SNX1-213ENST00000561026 LOC105369274A0A096LPK9 316 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 LOC102723532A0A0G2JNH3 316 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 A0A0J9YVX5 310 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 HYKKA2RU49 373 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 VSTM2BA6NLU5 285 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 SOCS6O14544 535 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 NRP2O60462 931 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 OGNP20774 298 aaKnown RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 ITGA3P26006 1051 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 TERF1P54274 439 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 GPS1Q13098 491 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 FASTKQ14296 549 aaKnown RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 EIF2S3LQ2VIR3 472 aaKnown RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 ANKRD20A4Q4UJ75 823 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 PRAMEF13Q5VWM6 474 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 NEPROQ6NW34 567 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 FBXO42Q6P3S6 717 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 KIRREL2Q6UWL6 708 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 SHISA6Q6ZSJ9 500 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 CENPUQ71F23 418 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 CILP2Q8IUL8 1156 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 LRRC8AQ8IWT6 810 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 OR4N4Q8N0Y3 316 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 DTWD1Q8N5C7 304 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 CISD2Q8N5K1 135 aaKnown RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 OR9A1PQ8NGU1 263 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 SSC4DQ8WTU2 575 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 SOX17Q9H6I2 414 aaPredicted RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 ASF1BQ9NVP2 202 aa15.5■□□□□ 0.07
SNX1-213ENST00000561026 CUEDC1Q9NWM3 386 aaPredicted RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 ZC3H7BQ9UGR2 993 aaKnown RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 TSR3Q9UJK0 312 aaKnown RBP15.5■□□□□ 0.07
SNX1-213ENST00000561026 MAU2Q9Y6X3 613 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms