RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 GOLGA7Q7Z5G4 137 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 PIP4P1Q86T03 277 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 THOC6Q86W42 341 aaKnown RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 AMIGO1Q86WK6 493 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 RBM12BQ8IXT5 1001 aaKnown RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 CCDC63Q8NA47 563 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 SETD7Q8WTS6 366 aaKnown RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 RSC1A1Q92681 617 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 CCDC126Q96EE4 140 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 PRR11Q96HE9 360 aaPredicted RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 PPM1MQ96MI6 270 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 OR2A14Q96R47 310 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 EGFL8Q99944 293 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 PAIP2Q9BPZ3 127 aaKnown RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 DRC3Q9H069 523 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 CCDC134Q9H6E4 229 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 MANSC1Q9H8J5 431 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 OR6C2Q9NZP2 312 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 PCDHB3Q9Y5E6 796 aa9.06□□□□□ -0.96
HERC1-206ENST00000559996 GOLGA4Q13439 2230 aaKnown RBP9.06□□□□□ -0.96
HERC1-206ENST00000559996 COL5A1P20908 1838 aaPredicted RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 SNRNP200O75643 2136 aaKnown RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 COL27A1Q8IZC6 1860 aaPredicted RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 KCNE1BA0A087WTH5 132 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 IGHV1OR21-1A0A087WYE8 117 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 A0A1W2PQM1 296 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 FAM221BA6H8Z2 402 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 OR6C74A6NCV1 312 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 C4orf47A7E2U8 309 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 K7EPI3 171 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 TM4SF5O14894 197 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SH3BP5O60239 455 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 NPHS1O60500 1241 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 LYPLA1O75608 230 aaPredicted RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 WFS1O76024 890 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SUPT7LO94864 414 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SERPINE1P05121 402 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 CHRNGP07510 517 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 CD22P20273 847 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 CD1CP29017 333 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 HSD17B2P37059 387 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 CASP2P42575 452 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 OR1D5P58170 312 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 ERVPABLB-1P60509 514 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 TBPL1P62380 186 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 OCRLQ01968 901 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 CLCQ05315 142 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 GALNT1Q10472 559 aaPredicted RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 TRAF3Q13114 568 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SQSTM1Q13501 440 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 GTF2H2Q13888 395 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 KRT33BQ14525 404 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 UGT3A2Q3SY77 523 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 ARL13AQ5H913 290 aaPredicted RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 TTC19Q6DKK2 380 aaPredicted RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 GTF2H2CQ6P1K8 395 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 ZNF574Q6ZN55 896 aaPredicted RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 TMPRSS9Q7Z410 1059 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 FAM129CQ86XR2 697 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 FAM20CQ8IXL6 584 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SYTL1Q8IYJ3 562 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 TCAIMQ8N3R3 496 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 ARFGAP2Q8N6H7 521 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 OR4K1Q8NGD4 311 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 OR52B6Q8NGF0 335 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 LCN9Q8WX39 176 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 ATL1Q8WXF7 558 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SMPDL3AQ92484 453 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 CNDP1Q96KN2 507 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 MAGEB18Q96M61 343 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 ZNF317Q96PQ6 595 aaPredicted RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 NTMT1Q9BV86 223 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 EDEM2Q9BV94 578 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 ABCG4Q9H172 646 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SPNS1Q9H2V7 528 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SRMSQ9H3Y6 488 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SYNPO2LQ9H987 977 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 SLCO1B3Q9NPD5 702 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 EVA1BQ9NVM1 165 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 WWOXQ9NZC7 414 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 NCDNQ9UBB6 729 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 HAO1Q9UJM8 370 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 MID2Q9UJV3 735 aa9.05□□□□□ -0.96
HERC1-206ENST00000559996 TNPO3Q9Y5L0 923 aaKnown RBP9.05□□□□□ -0.96
HERC1-206ENST00000559996 PCNX2A6NKB5 2137 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 OR5K3A6NET4 321 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 POLR3GO15318 223 aaPredicted RBP9.04□□□□□ -0.96
HERC1-206ENST00000559996 FLRT2O43155 660 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 TNFSF14O43557 240 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 NRP2O60462 931 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 CCNT2O60583 730 aaKnown RBP9.04□□□□□ -0.96
HERC1-206ENST00000559996 UBXN7O94888 489 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 WDR47O94967 919 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 POLR2CP19387 275 aaPredicted RBP9.04□□□□□ -0.96
HERC1-206ENST00000559996 ACP1P24666 158 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 SHMT2P34897 504 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 GPR3P46089 330 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 SLC1A6P48664 564 aa9.04□□□□□ -0.96
HERC1-206ENST00000559996 ATXN3P54252 364 aaPredicted RBP9.04□□□□□ -0.96
HERC1-206ENST00000559996 EPHA4P54764 986 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms