RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 TMEFF2Q9UIK5 374 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ABCG2Q9UNQ0 655 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ERVK-11Q9UQG0 969 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 TRAV19A0A0A6YYK7 116 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 LOC100130705A0A1B0GUX0 176 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 OR2AG2A6NM03 316 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 NEDD8-MDP1E9PL57 170 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 RFXANKO14593 260 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 MAN1A2O60476 641 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PFDN1O60925 122 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CPSF4O95639 269 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 RETP07949 1114 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PRPS2P11908 318 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ATP1B2P14415 290 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PFN3P60673 137 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 GTF2H3Q13889 308 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 GBX1Q14549 363 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CBX2Q14781 532 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 DEFB115Q30KQ5 88 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 POM121L1PQ3SYA9 428 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CCSMST1Q4G0I0 132 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 NOXRED1Q6NXP6 359 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 METTL2BQ6P1Q9 378 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 HSD11B1LQ7Z5J1 315 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ADHFE1Q8IWW8 467 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ZCCHC7Q8N3Z6 543 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 SVOPLQ8N434 492 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 LILRA3Q8N6C8 439 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CNIH3Q8TBE1 160 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 ZNF296Q8WUU4 475 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 CMTM7Q96FZ5 175 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 MYOCQ99972 504 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 DGCR6LQ9BY27 220 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 REXO4Q9GZR2 422 aaKnown RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 RMND5AQ9H871 391 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PLGRKTQ9HBL7 147 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 DNAJC11Q9NVH1 559 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 PAK1IP1Q9NWT1 392 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-216ENST00000559819 VPS4AQ9UN37 437 aa9.76□□□□□ -0.85
LRRC28-216ENST00000559819 MYOFQ9NZM1 2061 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 PTGES3LE9PB15 166 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 hCG_2039718K7EN88 272 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 YY2O15391 372 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 CCL16O15467 120 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 SGTAO43765 313 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 NUAK1O60285 661 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 SEC14L2O76054 403 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 LRG1P02750 347 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 C8GP07360 202 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 MAP4P27816 1152 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 TTKP33981 857 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 NFATC3Q12968 1075 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 ABRQ12979 859 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 UGT8Q16880 541 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 DPY19L1Q2PZI1 675 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 GGTA1PQ4G0N0 100 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 RBM48Q5RL73 367 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 MPP7Q5T2T1 576 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 FRG2Q64ET8 278 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 ZCCHC8Q6NZY4 707 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 CNKSR3Q6P9H4 555 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 CEP68Q76N32 757 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 DCP2Q8IU60 420 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 ZDHHC21Q8IVQ6 265 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 CLECL1Q8IZS7 167 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 L3MBTL4Q8NA19 623 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 SORCS1Q8WY21 1168 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 HDAC2Q92769 488 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 REXO5Q96IC2 774 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 FRG2BQ96QU4 278 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 MTERF1Q99551 399 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 C19orf43Q9BQ61 176 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 DPH2Q9BQC3 489 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 THG1LQ9NWX6 298 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 HS3ST2Q9Y278 367 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 PPIL1Q9Y3C6 166 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 LAMA3Q16787 3333 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 PABPN1LA6NDY0 278 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 FPGTO14772 594 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 WNT9AO14904 365 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 XPNPEP2O43895 674 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 NOL3O60936 208 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 XYLBO75191 536 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 JUNBP17275 347 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 CYP2A7P20853 494 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 ETV3P41162 512 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 PLA2G16P53816 162 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 ABHD18Q0P651 414 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 GRSF1Q12849 480 aaKnown RBP eCLIP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 SKIV2LQ15477 1246 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.75□□□□□ -0.85
LRRC28-216ENST00000559819 SLC39A5Q6ZMH5 540 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 VTCN1Q7Z7D3 282 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 CYP4Z1Q86W10 505 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 SYT12Q8IV01 421 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 ARL10Q8N8L6 244 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 OR52E4Q8NGH9 312 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 NELL1Q92832 810 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 TESCQ96BS2 214 aa9.75□□□□□ -0.85
LRRC28-216ENST00000559819 TCEAL4Q96EI5 215 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms