RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 OR56A3Q8NH54 315 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 OR2W6PQ8NHA6 318 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 SNIP1Q8TAD8 396 aaKnown RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 EPS8L3Q8TE67 593 aaKnown RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.01□□□□□ -0.652e-6■■■■■ 29
SNX1-204ENST00000559061 ZCCHC14Q8WYQ9 949 aaKnown RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 FBXL8Q96CD0 374 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 NXNL1Q96CM4 212 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 TSPAN17Q96FV3 270 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 FCRL4Q96PJ5 515 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 OR6C1Q96RD1 312 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 ATOH8Q96SQ7 321 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 MIPEPQ99797 713 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 TMEM79Q9BSE2 394 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 DDA1Q9BW61 102 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 SGPP1Q9BX95 441 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 RAB11FIP5Q9BXF6 653 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 CHRNA10Q9GZZ6 450 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 ATG10Q9H0Y0 220 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 CCDC86Q9H6F5 360 aaKnown RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 SYTL2Q9HCH5 934 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 FBXO8Q9NRD0 319 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 CUEDC1Q9NWM3 386 aaPredicted RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 SLC39A1Q9NY26 324 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 UTP6Q9NYH9 597 aaKnown RBP11.01□□□□□ -0.65
SNX1-204ENST00000559061 FETUBQ9UGM5 382 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 PILRAQ9UKJ1 303 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 OARD1Q9Y530 152 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 PCDHGA7Q9Y5G6 932 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 AK5Q9Y6K8 562 aa11.01□□□□□ -0.65
SNX1-204ENST00000559061 A0A096LPK6 155 aa11□□□□□ -0.65
SNX1-204ENST00000559061 TEX51A0A1B0GUA7 166 aa11□□□□□ -0.65
SNX1-204ENST00000559061 OR2A25A4D2G3 310 aa11□□□□□ -0.65
SNX1-204ENST00000559061 TRIM49D1C9J1S8 452 aa11□□□□□ -0.65
SNX1-204ENST00000559061 NVLO15381 856 aaKnown RBP11□□□□□ -0.65
SNX1-204ENST00000559061 TAPBPO15533 448 aa11□□□□□ -0.65
SNX1-204ENST00000559061 PRAMEF4O60810 478 aa11□□□□□ -0.65
SNX1-204ENST00000559061 MED26O95402 600 aa11□□□□□ -0.65
SNX1-204ENST00000559061 DLGAP3O95886 979 aa11□□□□□ -0.65
SNX1-204ENST00000559061 INHBAP08476 426 aa11□□□□□ -0.65
SNX1-204ENST00000559061 ENO2P09104 434 aaPredicted RBP11□□□□□ -0.65
SNX1-204ENST00000559061 SBK3P0C264 359 aa11□□□□□ -0.65
SNX1-204ENST00000559061 MSL3P1P0C860 447 aa11□□□□□ -0.65
SNX1-204ENST00000559061 JMJD7P0C870 316 aa11□□□□□ -0.65
SNX1-204ENST00000559061 FGF5P12034 268 aa11□□□□□ -0.65
SNX1-204ENST00000559061 CYP2A7P20853 494 aa11□□□□□ -0.65
SNX1-204ENST00000559061 MLLT3P42568 568 aaPredicted RBP11□□□□□ -0.65
SNX1-204ENST00000559061 SLC6A12P48065 614 aa11□□□□□ -0.65
SNX1-204ENST00000559061 SERPINB8P50452 374 aa11□□□□□ -0.65
SNX1-204ENST00000559061 ERVPABLB-1P60509 514 aa11□□□□□ -0.65
SNX1-204ENST00000559061 ILF2Q12905 390 aaKnown RBP11□□□□□ -0.65
SNX1-204ENST00000559061 FBXO48Q5FWF7 155 aa11□□□□□ -0.65
SNX1-204ENST00000559061 PRAMEF9Q5VWM5 478 aa11□□□□□ -0.65
SNX1-204ENST00000559061 ARMC6Q6NXE6 501 aa11□□□□□ -0.65
SNX1-204ENST00000559061 AGTRAPQ6RW13 159 aa11□□□□□ -0.65
SNX1-204ENST00000559061 TIPARPQ7Z3E1 657 aaKnown RBP11□□□□□ -0.65
SNX1-204ENST00000559061 ZFAND4Q86XD8 727 aa11□□□□□ -0.65
SNX1-204ENST00000559061 DTX1Q86Y01 620 aa11□□□□□ -0.65
SNX1-204ENST00000559061 KLHDC8AQ8IYD2 350 aa11□□□□□ -0.65
SNX1-204ENST00000559061 TMEM151AQ8N4L1 468 aa11□□□□□ -0.65
SNX1-204ENST00000559061 SLC38A9Q8NBW4 561 aa11□□□□□ -0.65
SNX1-204ENST00000559061 OR1L3Q8NH93 324 aa11□□□□□ -0.65
SNX1-204ENST00000559061 MAGEC3Q8TD91 643 aa11□□□□□ -0.65
SNX1-204ENST00000559061 UBLCP1Q8WVY7 318 aaPredicted RBP11□□□□□ -0.65
SNX1-204ENST00000559061 SMPDL3AQ92484 453 aa11□□□□□ -0.65
SNX1-204ENST00000559061 KIAA1191Q96A73 305 aa11□□□□□ -0.65
SNX1-204ENST00000559061 PYCR2Q96C36 320 aa11□□□□□ -0.65
SNX1-204ENST00000559061 CCDC138Q96M89 665 aa11□□□□□ -0.65
SNX1-204ENST00000559061 TAAR9Q96RI9 348 aa11□□□□□ -0.65
SNX1-204ENST00000559061 ACAT2Q9BWD1 397 aa11□□□□□ -0.65
SNX1-204ENST00000559061 INTS7Q9NVH2 962 aaKnown RBP11□□□□□ -0.65
SNX1-204ENST00000559061 TAC3Q9UHF0 121 aa11□□□□□ -0.65
SNX1-204ENST00000559061 SSUH2Q9Y2M2 353 aa11□□□□□ -0.65
SNX1-204ENST00000559061 RAXQ9Y2V3 346 aa11□□□□□ -0.65
SNX1-204ENST00000559061 TPRP12270 2363 aaKnown RBP11□□□□□ -0.65
SNX1-204ENST00000559061 AHCTF1Q8WYP5 2266 aa11□□□□□ -0.65
SNX1-204ENST00000559061 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.99□□□□□ -0.65
SNX1-204ENST00000559061 GUCA1CO95843 209 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 NUDT17P0C025 328 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 EPORP19235 508 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 TFEBP19484 476 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 MAP4P27816 1152 aaKnown RBP10.99□□□□□ -0.65
SNX1-204ENST00000559061 CRABP2P29373 138 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 MSH2P43246 934 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 SERPINB9P50453 376 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 SLC12A2P55011 1212 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 AP1S2P56377 157 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 CDKL1Q00532 357 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 CLN3Q13286 438 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 TUBB3Q13509 450 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 NAE1Q13564 534 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 TGFBIQ15582 683 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 TGIF1Q15583 401 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 TECRLQ5HYJ1 363 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 ICE2Q659A1 982 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 PWWP2BQ6NUJ5 590 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 EMBQ6PCB8 327 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 TTC23LQ6PF05 361 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 FIGLAQ6QHK4 219 aa10.99□□□□□ -0.65
SNX1-204ENST00000559061 TIFABQ6ZNK6 161 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms