RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 HOGA1Q86XE5 327 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 VSIG1Q86XK7 387 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 ERC1Q8IUD2 1116 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 TMEM139Q8IV31 216 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 GTF3AQ92664 365 aaKnown RBP3.94□□□□□ -1.78
COPS2-204ENST00000558545 SLCO2A1Q92959 643 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 PGAP3Q96FM1 320 aaPredicted RBP3.94□□□□□ -1.78
COPS2-204ENST00000558545 PIGQQ9BRB3 760 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 NUP85Q9BW27 656 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 S1PR5Q9H228 398 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 CACNG4Q9UBN1 327 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 TRIM17Q9Y577 477 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 PCNX3Q9H6A9 2034 aa3.94□□□□□ -1.78
COPS2-204ENST00000558545 ANKUB1A6NFN9 424 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 ANKRD61A6NGH8 418 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 C15orf61A6NNL5 157 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 TSPAN1O60635 241 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 TBX10O75333 385 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 ZWINTO95229 277 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 VTNP04004 478 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 OR2T7P0C7T2 308 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 ZSCAN5DPP0CG00 497 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 MYBL1P10243 752 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 GABRA5P31644 462 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 PPP5CP53041 499 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 ELFN2Q5R3F8 820 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 Q6ZRP5 223 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 ARHGAP24Q8N264 748 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 TDRD5Q8NAT2 981 aaKnown RBP3.93□□□□□ -1.78
COPS2-204ENST00000558545 PTPMT1Q8WUK0 201 aaPredicted RBP3.93□□□□□ -1.78
COPS2-204ENST00000558545 SECISBP2LQ93073 1101 aaKnown RBP3.93□□□□□ -1.78
COPS2-204ENST00000558545 ZNF622Q969S3 477 aaKnown RBP eCLIP3.93□□□□□ -1.78
COPS2-204ENST00000558545 RMDN1Q96DB5 314 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 FOXN4Q96NZ1 517 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 SH3GLB2Q9NR46 395 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 SERINC1Q9NRX5 453 aa3.93□□□□□ -1.78
COPS2-204ENST00000558545 NOL7Q9UMY1 257 aaKnown RBP3.93□□□□□ -1.78
COPS2-204ENST00000558545 LOC102723996A0A087X1L8 192 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 GPR75-ASB3A0A0A6YYF3 556 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 TMEM221A6NGB7 291 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 EPM2AB3EWF7 344 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 CCER2I3L3R5 266 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 PSMD10O75832 226 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 HSPA4LO95757 839 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 BCL10O95999 233 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 SLC9A3P48764 834 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 CSRP3P50461 194 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 TPD52P55327 224 aaPredicted RBP3.92□□□□□ -1.78
COPS2-204ENST00000558545 ELAVL2Q12926 359 aaKnown RBP3.92□□□□□ -1.78
COPS2-204ENST00000558545 RIGQ13278 110 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 ENPP2Q13822 863 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 SNTB1Q13884 538 aaKnown RBP3.92□□□□□ -1.78
COPS2-204ENST00000558545 TNIP1Q15025 636 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 NECTIN1Q15223 517 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 LETM2Q2VYF4 491 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 ALDH1L2Q3SY69 923 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 TAF1BQ53T94 588 aaPredicted RBP3.92□□□□□ -1.78
COPS2-204ENST00000558545 SPDYCQ5MJ68 293 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 PAQR6Q6TCH4 344 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 PLPPR4Q7Z2D5 763 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 CFAP206Q8IYR0 622 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 GUF1Q8N442 669 aaKnown RBP3.92□□□□□ -1.78
COPS2-204ENST00000558545 AFAP1Q8N556 730 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 OR6J1Q8NGC5 347 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 VPS33AQ96AX1 596 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 DHX58Q96C10 678 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 DGAT2Q96PD7 388 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 RAD9AQ99638 391 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 LRRC61Q9BV99 259 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 OR2B2Q9GZK3 357 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 UPF3AQ9H1J1 476 aaKnown RBP3.92□□□□□ -1.78
COPS2-204ENST00000558545 OR6C2Q9NZP2 312 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 WDR35Q9P2L0 1181 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 PPP1R3CQ9UQK1 317 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 PCDH11YQ9BZA8 1340 aa3.92□□□□□ -1.78
COPS2-204ENST00000558545 TCRBV21S2A2A0A5A6 115 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 FEZF1A0PJY2 475 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 SOCS3O14543 225 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 DIAPH2O60879 1101 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 GLRA3O75311 464 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 HSPA8P11142 646 aaKnown RBP3.91□□□□□ -1.78
COPS2-204ENST00000558545 CYP2A7P20853 494 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 CPT2P23786 658 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 PAX9P55771 341 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 NFATC2Q13469 925 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 ALCAMQ13740 583 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 COG2Q14746 738 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 SNAPC1Q16533 368 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 SLC25A47Q6Q0C1 308 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 FAM47EQ6ZV65 393 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 CHST3Q7LGC8 479 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 PTAR1Q7Z6K3 402 aaPredicted RBP3.91□□□□□ -1.78
COPS2-204ENST00000558545 SLFN11Q7Z7L1 901 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 CDC20BQ86Y33 519 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 FBXO39Q8N4B4 442 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.91□□□□□ -1.78
COPS2-204ENST00000558545 TSPAN14Q8NG11 270 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 EXD1Q8NHP7 514 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 LPGAT1Q92604 370 aa3.91□□□□□ -1.78
COPS2-204ENST00000558545 ARHGAP45Q92619 1136 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms