RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 TMCC2O75069 709 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 GFPT2O94808 682 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TNFSF15O95150 251 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 STBD1O95210 358 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 SIX3O95343 332 aaPredicted RBP5.71□□□□□ -1.5
RTF1-204ENST00000558117 RPN1P04843 607 aaKnown RBP5.71□□□□□ -1.5
RTF1-204ENST00000558117 THEGLP0DJG4 465 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 CTPS1P17812 591 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 EPHA8P29322 1005 aaPredicted RBP5.71□□□□□ -1.5
RTF1-204ENST00000558117 CCKBRP32239 447 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 EIF2DP41214 584 aaKnown RBP5.71□□□□□ -1.5
RTF1-204ENST00000558117 GPR12P47775 334 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TUBP50607 506 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 ABATP80404 500 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 ZXDBP98169 803 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 EGR4Q05215 589 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 HNF4GQ14541 408 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 UGCGQ16739 394 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 UBE2SQ16763 222 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TXNDC8Q6A555 127 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TRILQ7L0X0 811 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TRMT11Q7Z4G4 463 aaKnown RBP5.71□□□□□ -1.5
RTF1-204ENST00000558117 VASH2Q86V25 355 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TBC1D10CQ8IV04 446 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 RBFAQ8N0V3 343 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 ARL14Q8N4G2 192 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 IQCF1Q8N6M8 205 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 PRR26Q8N8Z3 221 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 GPT2Q8TD30 523 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TMEM18Q96B42 140 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 HVCN1Q96D96 273 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 ATXN7L3BQ96GX2 97 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 PGLYRP2Q96PD5 576 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 GFM1Q96RP9 751 aaKnown RBP5.71□□□□□ -1.5
RTF1-204ENST00000558117 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 TRIM6Q9C030 488 aaPredicted RBP5.71□□□□□ -1.5
RTF1-204ENST00000558117 WASH6PQ9NQA3 447 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 ZNF580Q9UK33 172 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 ARID2Q68CP9 1835 aa5.71□□□□□ -1.5
RTF1-204ENST00000558117 HEATR9A2RTY3 570 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 BTBD18B2RXH4 712 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 ERLIN2O94905 339 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 PCP11498 1178 aaKnown RBP5.7□□□□□ -1.5
RTF1-204ENST00000558117 CD1EP15812 388 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 PSMC2P35998 433 aaKnown RBP5.7□□□□□ -1.5
RTF1-204ENST00000558117 RAD52P43351 418 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 CENPAP49450 140 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 HDAC4P56524 1084 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 RPL10AP62906 217 aaKnown RBP5.7□□□□□ -1.5
RTF1-204ENST00000558117 TRPC3Q13507 836 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 CAPSQ13938 189 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 ZNF667Q5HYK9 610 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 NCAPH2Q6IBW4 605 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 CENPPQ6IPU0 288 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 SLC22A25Q6T423 547 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 MFSD6Q6ZSS7 791 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 GALNT5Q7Z7M9 940 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 ITIH5Q86UX2 942 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 CDR2LQ86X02 465 aaPredicted RBP5.7□□□□□ -1.5
RTF1-204ENST00000558117 ESX1Q8N693 406 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 PLD5Q8N7P1 536 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 NKAIN3Q8N8D7 197 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 PCYOX1LQ8NBM8 494 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 MCPH1Q8NEM0 835 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 ESR2Q92731 530 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 RSRC1Q96IZ7 334 aaKnown RBP5.7□□□□□ -1.5
RTF1-204ENST00000558117 GCNAQ96QF7 691 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 ACOX2Q99424 681 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 GABRG3Q99928 467 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 MSTO1Q9BUK6 570 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 PSTPIP2Q9H939 334 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 WWOXQ9NZC7 414 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 PKDREJQ9NTG1 2253 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 SHANK1Q9Y566 2161 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 NEDD4P46934 1319 aa5.7□□□□□ -1.5
RTF1-204ENST00000558117 RYR3Q15413 4870 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 VILLO15195 856 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 HOXC11O43248 304 aaPredicted RBP5.69□□□□□ -1.5
RTF1-204ENST00000558117 IGLV3-19P01714 112 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 OR4Q2P0C623 313 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 CBSLP0DN79 551 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 LIPCP11150 499 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 ARF4P18085 180 aaPredicted RBP5.69□□□□□ -1.5
RTF1-204ENST00000558117 NMT1P30419 496 aaKnown RBP5.69□□□□□ -1.5
RTF1-204ENST00000558117 OXTRP30559 389 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 DCTDP32321 178 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 TTKP33981 857 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 CBSP35520 551 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 QARSP47897 775 aaKnown RBP5.69□□□□□ -1.5
RTF1-204ENST00000558117 PCYT1AP49585 367 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 TPMTP51580 245 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 CDH15P55291 814 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 HAND2P61296 217 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 KDSRQ06136 332 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 LTBQ06643 244 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 EDRF1Q3B7T1 1238 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 ZNF585BQ52M93 769 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 LACTB2Q53H82 288 aaPredicted RBP5.69□□□□□ -1.5
RTF1-204ENST00000558117 SLC45A4Q5BKX6 768 aa5.69□□□□□ -1.5
RTF1-204ENST00000558117 NIPA1Q7RTP0 329 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms