RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 IRAK1BP1Q5VVH5 260 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 KIAA0930Q6ICG6 404 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-235ENST00000557740 CASC4Q6P4E1 433 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 ZNF662Q6ZS27 426 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 OVCH1Q7RTY7 1134 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 ZADH2Q8N4Q0 377 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 OR2L3Q8NG85 312 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 HMGCLL1Q8TB92 370 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 ZUFSPQ96AP4 578 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 NACC2Q96BF6 587 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 FAM136AQ96C01 138 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 BIRC8Q96P09 236 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 PSMG3-AS1Q96PY0 264 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 TCF12Q99081 682 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 SAMD15Q9P1V8 674 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 B3GNT3Q9Y2A9 372 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 VPS9D1Q9Y2B5 631 aa14.02□□□□□ -0.17
SHMT2-235ENST00000557740 PCSK5Q92824 1860 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 E5RI56 91 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 MASP2O00187 686 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 NRDCO43847 1150 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 PRICKLE3O43900 615 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-235ENST00000557740 CTSVO60911 334 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 ERVK-10P10266 1014 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 CHRM3P20309 590 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 OGNP20774 298 aaKnown RBP14.01□□□□□ -0.17
SHMT2-235ENST00000557740 CMPK1P30085 196 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 CXCR5P32302 372 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 GPS1Q13098 491 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 AIMP2Q13155 320 aaKnown RBP14.01□□□□□ -0.17
SHMT2-235ENST00000557740 RBBP7Q16576 425 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 FAM214AQ32MH5 1076 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 ARMC3Q5W041 872 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 IGFL3Q6UXB1 125 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 METTL27Q8N6F8 245 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-235ENST00000557740 VPS50Q96JG6 964 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 ZNF285Q96NJ3 590 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 SLC26A1Q9H2B4 701 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 SOX17Q9H6I2 414 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-235ENST00000557740 ZNF552Q9H707 407 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-235ENST00000557740 SLC6A20Q9NP91 592 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 FAM114A2Q9NRY5 505 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 IL1RAPL1Q9NZN1 696 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 CTSFQ9UBX1 484 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 CRYL1Q9Y2S2 319 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 KLK4Q9Y5K2 254 aa14.01□□□□□ -0.17
SHMT2-235ENST00000557740 SNRNP200O75643 2136 aaKnown RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 SPENQ96T58 3664 aaKnown RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 A0A0J9YVX5 310 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 TCRBV7S3A2A0A539 114 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 FITM1A5D6W6 292 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 TCP11X1B4DZS4 312 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 SRPX2O60687 465 aaPredicted RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 ONECUT2O95948 504 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 EIF2S1P05198 315 aaKnown RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 OR1D4P47884 311 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 ADARP55265 1226 aaKnown RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 SOX8P57073 446 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 MRPL49Q13405 166 aaKnown RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 TSTA3Q13630 321 aaPredicted RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 GBX1Q14549 363 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 KCNJ11Q14654 390 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 NKG7Q16617 165 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 PLEKHN1Q494U1 663 aaPredicted RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 ANKRD20A4Q4UJ75 823 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 WASHC2DQ5SRD0 308 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 PRAMEF13Q5VWM6 474 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 FRMPD2BQ6IN97 320 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 SHISA6Q6ZSJ9 500 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 COX15Q7KZN9 410 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 RNF44Q7L0R7 432 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 TMEM151BQ8IW70 566 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 PRELID2Q8N945 189 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 SSC4DQ8WTU2 575 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 ZDHHC19Q8WVZ1 309 aaPredicted RBP14□□□□□ -0.17
SHMT2-235ENST00000557740 SPSB2Q99619 263 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 ACAT2Q9BWD1 397 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 ENAMQ9NRM1 1142 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 MAU2Q9Y6X3 613 aa14□□□□□ -0.17
SHMT2-235ENST00000557740 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 A0A1W2PPV9 198 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 HYKKA2RU49 373 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 ARHGEF33A8MVX0 844 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 SOCS6O14544 535 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 ALOX12BO75342 701 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 AVILO75366 819 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 MATN4O95460 622 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 CATP04040 527 aaKnown RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 PKMP14618 531 aaKnown RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 RPA3P35244 121 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 OCA2Q04671 838 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 KCTD19Q17RG1 926 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 MUM1Q2TAK8 710 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 TTLL9Q3SXZ7 439 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 TUBB8Q3ZCM7 444 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.99□□□□□ -0.17
SHMT2-235ENST00000557740 ZNF470Q6ECI4 717 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 NEPROQ6NW34 567 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 CILP2Q8IUL8 1156 aa13.99□□□□□ -0.17
SHMT2-235ENST00000557740 OR2A1Q8NGT9 310 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms