RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 ELOCQ15369 112 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 TBCCQ15814 346 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 XKR7Q5GH72 579 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 XKR6Q5GH73 641 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 METTL21CQ5VZV1 264 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 GRHL2Q6ISB3 625 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 TMPRSS11BQ86T26 416 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 TRIM48Q8IWZ4 208 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 CEP70Q8NHQ1 597 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 LMX1AQ8TE12 382 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 SLC5A11Q8WWX8 675 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 CCT6BQ92526 530 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 PRR11Q96HE9 360 aaPredicted RBP14□□□□□ -0.17
ARHGEF40-208ENST00000557498 C3orf30Q96M34 536 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 NRTNQ99748 197 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 CCT7Q99832 543 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 HAUS8Q9BT25 410 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 PCBD2Q9H0N5 130 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 XKR8Q9H6D3 395 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 POT1Q9NUX5 634 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 SUSD2Q9UGT4 822 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 TRIM33Q9UPN9 1127 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 SH2B3Q9UQQ2 575 aa14□□□□□ -0.17
ARHGEF40-208ENST00000557498 TRBV23OR9-2A0A075B6M9 112 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 A0A1B0GVT2 93 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 A0A1W2PPV9 198 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 MANBAO00462 879 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 FFAR3O14843 346 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 GPR42O15529 346 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 WFS1O76024 890 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 KRT6AP02538 564 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 KRT6BP04259 564 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 LINC00032P0C843 101 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 GNSP15586 552 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 XRCC1P18887 633 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 SHMT2P34897 504 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 CNR2P34972 360 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 HNF4AP41235 474 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 KRT6CP48668 564 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 HNRNPKP61978 463 aaKnown RBP eCLIP13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 UBE2IP63279 158 aaKnown RBP13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 DOC2AQ14183 400 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 E2F2Q14209 437 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 CPSF6Q16630 551 aaKnown RBP eCLIP13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZNF528Q3MIS6 628 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 SPDYAQ5MJ70 313 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 THEMIS2Q5TEJ8 643 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 FAM91A1Q658Y4 838 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 IL27RAQ6UWB1 636 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 SCIMPQ6UWF3 145 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 SLCO4C1Q6ZQN7 724 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 CCDC121Q6ZUS5 278 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 CLNKQ7Z7G1 428 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 GKN2Q86XP6 184 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 C2orf73Q8N5S3 287 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 GBP7Q8N8V2 638 aaPredicted RBP13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 LINC01555Q8NAE3 123 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZDHHC1Q8WTX9 485 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZFPM2Q8WW38 1151 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 USP7Q93009 1102 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 NEIL2Q969S2 332 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 WDR34Q96EX3 536 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 EHD1Q9H4M9 534 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 ERVMER34-1Q9H9K5 563 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 SAR1AQ9NR31 198 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZSCAN32Q9NX65 697 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 SNX6Q9UNH7 406 aa13.99□□□□□ -0.17
ARHGEF40-208ENST00000557498 KMT2EQ8IZD2 1858 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 ATP6AP2A0A1C7CYW4 349 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 B4DGG1 531 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 ATP6AP2O75787 350 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 UBOX5O94941 541 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 VIPP01282 170 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 CD22P20273 847 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 VARSP26640 1264 aaKnown RBP13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 AVPR2P30518 371 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 CASP2P42575 452 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 CTSKP43235 329 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 ABRAXAS2Q15018 415 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZRSR2Q15696 482 aaKnown RBP13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 GALNTL6Q49A17 601 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 PEAR1Q5VY43 1037 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 ATG9BQ674R7 924 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 LARP4Q71RC2 724 aaKnown RBP eCLIP13.98□□□□□ -0.175e-6■■□□□ 12.4
ARHGEF40-208ENST00000557498 CEP68Q76N32 757 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 NAGSQ8N159 534 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 SDR16C5Q8N3Y7 309 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 SFRP1Q8N474 314 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZNF548Q8NEK5 533 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 FAM46DQ8NEK8 389 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 OR2T11Q8NH01 316 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 SLC37A2Q8TED4 501 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 LCN9Q8WX39 176 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 PATE1Q8WXA2 126 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 JPH3Q8WXH2 748 aaPredicted RBP13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 SH3KBP1Q96B97 665 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 TUBGCP3Q96CW5 907 aa13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 PTCD3Q96EY7 689 aaKnown RBP13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 ZC3H10Q96K80 434 aaKnown RBP13.98□□□□□ -0.17
ARHGEF40-208ENST00000557498 EFCAB11Q9BUY7 163 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms