RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 MCM3P25205 808 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 VARSP26640 1264 aaKnown RBP13.58□□□□□ -0.24
SNX6-210ENST00000557341 FMO4P31512 558 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 GRIA3P42263 894 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 VPS41P49754 854 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 TERF1P54274 439 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 FOXL2P58012 376 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 GBX1Q14549 363 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 KCNJ11Q14654 390 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 INPP5JQ15735 1006 aaPredicted RBP13.58□□□□□ -0.24
SNX6-210ENST00000557341 CCSMST1Q4G0I0 132 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 PRR30Q53SZ7 412 aaPredicted RBP13.58□□□□□ -0.24
SNX6-210ENST00000557341 CASC4Q6P4E1 433 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 CES3Q6UWW8 571 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 LRRC8AQ8IWT6 810 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 PRELID2Q8N945 189 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 OR2L3Q8NG85 312 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 NACC2Q96BF6 587 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 ZNF285Q96NJ3 590 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 MIPEPQ99797 713 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 ENAMQ9NRM1 1142 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 SAMD15Q9P1V8 674 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 MAP10Q9P2G4 905 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 TSR3Q9UJK0 312 aaKnown RBP13.58□□□□□ -0.24
SNX6-210ENST00000557341 NXT1Q9UKK6 140 aaKnown RBP13.58□□□□□ -0.24
SNX6-210ENST00000557341 VPS9D1Q9Y2B5 631 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 KLK4Q9Y5K2 254 aa13.58□□□□□ -0.24
SNX6-210ENST00000557341 FITM1A5D6W6 292 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 E5RI56 91 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 CTSVO60911 334 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 MATN4O95460 622 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 ONECUT2O95948 504 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 GP1BBP13224 206 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 CHRM3P20309 590 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 ITGAXP20702 1163 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 MMP11P24347 488 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 MAGEA6P43360 314 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 CCZ1BP86790 482 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 CCZ1P86791 482 aaPredicted RBP13.57□□□□□ -0.24
SNX6-210ENST00000557341 GPS1Q13098 491 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 TRIP13Q15645 432 aaPredicted RBP13.57□□□□□ -0.24
SNX6-210ENST00000557341 FAM214AQ32MH5 1076 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 FHL5Q5TD97 284 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 COX15Q7KZN9 410 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 RNF44Q7L0R7 432 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 OVCH1Q7RTY7 1134 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 CILP2Q8IUL8 1156 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 IQCKQ8N0W5 287 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 TM9SF4Q92544 642 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 FAM136AQ96C01 138 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 SPSB2Q99619 263 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 SLC26A1Q9H2B4 701 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 FAM114A2Q9NRY5 505 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 INTS10Q9NVR2 710 aaKnown RBP13.57□□□□□ -0.24
SNX6-210ENST00000557341 CDC23Q9UJX2 597 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 B3GNT3Q9Y2A9 372 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 CRYL1Q9Y2S2 319 aa13.57□□□□□ -0.24
SNX6-210ENST00000557341 A0A1W2PPV9 198 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 BLACEA4D250 179 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 SRPX2O60687 465 aaPredicted RBP13.56□□□□□ -0.24
SNX6-210ENST00000557341 AVILO75366 819 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 AGFG2O95081 481 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 KRT14P02533 472 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 ERGP11308 486 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 CMPK1P30085 196 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 SOX8P57073 446 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 VSX2P58304 361 aaPredicted RBP13.56□□□□□ -0.24
SNX6-210ENST00000557341 AIMP2Q13155 320 aaKnown RBP13.56□□□□□ -0.24
SNX6-210ENST00000557341 NKG7Q16617 165 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 KCTD19Q17RG1 926 aaPredicted RBP13.56□□□□□ -0.24
SNX6-210ENST00000557341 ZNF470Q6ECI4 717 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 OR2A1Q8NGT9 310 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 ZNF669Q96BR6 464 aaPredicted RBP13.56□□□□□ -0.24
SNX6-210ENST00000557341 ZNF552Q9H707 407 aaPredicted RBP13.56□□□□□ -0.24
SNX6-210ENST00000557341 ATP13A2Q9NQ11 1180 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 IL1RAPL1Q9NZN1 696 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 CTSFQ9UBX1 484 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 FBXL4Q9UKA2 621 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 PPP2R2CQ9Y2T4 447 aa13.56□□□□□ -0.24
SNX6-210ENST00000557341 A0A0J9YVX5 310 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 ARHGEF33A8MVX0 844 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 NRP2O60462 931 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 PHF2O75151 1096 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 PSIP1O75475 530 aaKnown RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 CATP04040 527 aaKnown RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 ERVK-10P10266 1014 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 MLNP12872 115 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 PKMP14618 531 aaKnown RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 ITGA3P26006 1051 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 DHX34Q14147 1143 aaKnown RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 FASTKQ14296 549 aaKnown RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 KLHL38Q2WGJ6 581 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 TTLL9Q3SXZ7 439 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 ANKRD20A4Q4UJ75 823 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.55□□□□□ -0.24
SNX6-210ENST00000557341 WASHC2DQ5SRD0 308 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 ANKRD22Q5VYY1 191 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 FRMPD2BQ6IN97 320 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 NEPROQ6NW34 567 aa13.55□□□□□ -0.24
SNX6-210ENST00000557341 TTC27Q6P3X3 843 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms