RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 A0A1W2PQM1 296 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 ZSCAN5CA6NGD5 496 aaPredicted RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 OR6C76A6NM76 312 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SRRM3A6NNA2 597 aaPredicted RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 LINC00473A8K010 186 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 A8MZ25 164 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 E5RJQ4 531 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 H3BQF6 201 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 M0QYG6 137 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 AGPSO00116 658 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CTDSP2O14595 271 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 PTGESO14684 152 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 MDM4O15151 490 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 INPPL1O15357 1258 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 EIF3HO15372 352 aaKnown RBP eCLIP5.06□□□□□ -1.6
SRP54-211ENST00000556445 TRAPPC3O43617 180 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TRIAP1O43715 76 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 LIASO43766 372 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SLC25A17O43808 307 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SYF2O95926 243 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 KRT14P02533 472 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CHRNA1P02708 482 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 IVLP07476 585 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 GRPP07492 148 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 INHBAP08476 426 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 PIM1P11309 404 aaPredicted RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 TPH1P17752 444 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TGM2P21980 687 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CCNCP24863 283 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 PTPN3P26045 913 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CD38P28907 300 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 MIPP30301 263 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 HSD17B3P37058 310 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 PBX3P40426 434 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CDKN2BP42772 138 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 RPL21P46778 160 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 ATP5OP48047 213 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 ACLYP53396 1101 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 ATXN3P54252 364 aaPredicted RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 PMS2P54278 862 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 VCPP55072 806 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 PRAMEP78395 509 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 MRPS25P82663 173 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 SLC25A11Q02978 314 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 RALGDSQ12967 914 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 NPRL3Q12980 569 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 BFSP2Q13515 415 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 BMPR2Q13873 1038 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SNTB1Q13884 538 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 KRT81Q14533 505 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TAZQ16635 292 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 HYAL4Q2M3T9 481 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TPGS2Q68CL5 300 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 AADACL2Q6P093 401 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 PMF1Q6P1K2 205 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TTC27Q6P3X3 843 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 ZCCHC12Q6PEW1 402 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 PPP1R21Q6ZMI0 780 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 LEKR1Q6ZMV7 388 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 MSANTD1Q6ZTZ1 278 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 FAM183BPQ6ZVS7 135 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 STRADAQ7RTN6 431 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 GRASPQ7Z6J2 395 aaPredicted RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 PHLDB2Q86SQ0 1253 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 JOSD2Q8TAC2 188 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 UBA3Q8TBC4 463 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 FBXO25Q8TCJ0 367 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 URGCPQ8TCY9 931 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 HMGB4Q8WW32 186 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 C1orf54Q8WWF1 131 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SLC5A11Q8WWX8 675 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CORO2AQ92828 525 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 GRAMD1AQ96CP6 724 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 ATP6V1G3Q96LB4 118 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SENP8Q96LD8 212 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CFAP57Q96MR6 1250 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 GDAP1L1Q96MZ0 367 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TTC25Q96NG3 672 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 FAM111AQ96PZ2 611 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 FAM118BQ9BPY3 351 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 SYT15Q9BQS2 421 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 ZNF670Q9BS34 389 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 MED10Q9BTT4 135 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TMEM109Q9BVC6 243 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 HEMGNQ9BXL5 484 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 DUSP16Q9BY84 665 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 ABCG8Q9H221 673 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CNOT10Q9H9A5 744 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 LRRC4Q9HBW1 653 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TM9SF3Q9HD45 589 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 POLE3Q9NRF9 147 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 ZDHHC18Q9NUE0 388 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 FAM49BQ9NUQ9 324 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 TMLHEQ9NVH6 421 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CHCHD3Q9NX63 227 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 RNF186Q9NXI6 227 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 UTP6Q9NYH9 597 aaKnown RBP5.06□□□□□ -1.6
SRP54-211ENST00000556445 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.06□□□□□ -1.6
SRP54-211ENST00000556445 GRHL1Q9NZI5 618 aa5.06□□□□□ -1.6
SRP54-211ENST00000556445 CWC15Q9P013 229 aaKnown RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms