RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 GPR22Q99680 433 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 RBBP8Q99708 897 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 CTRCQ99895 268 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 RHOXF2Q9BQY4 288 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 ZPBPQ9BS86 351 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 CDC42EP4Q9H3Q1 356 aaKnown RBP9.31□□□□□ -0.92
SRP54-210ENST00000556380 FAM60AQ9NP50 221 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 SPATA7Q9P0W8 599 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 SLC39A10Q9ULF5 831 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 PDE10AQ9Y233 779 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 KLK4Q9Y5K2 254 aa9.31□□□□□ -0.92
SRP54-210ENST00000556380 A0A0J9YY10 115 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ISM1B1AKI9 464 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 E7ENX8 843 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 H3BMH7 237 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 POLR1CO15160 346 aaPredicted RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZBTB14O43829 449 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 SLC16A8O95907 504 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 C8GP07360 202 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 FAM153BP0C7A2 387 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 SPTBP11277 2137 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZNF37AP17032 561 aaPredicted RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZNF28P17035 718 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 CDH3P22223 829 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 CD82P27701 267 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 HSD17B2P37059 387 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 RGS4P49798 205 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 CSRP3P50461 194 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 TAP2Q03519 686 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 CLN3Q13286 438 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZKSCAN8Q15776 578 aaPredicted RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 PHKG1Q16816 387 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZXDCQ2QGD7 858 aaPredicted RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 FAM153CQ494X1 144 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.3□□□□□ -0.92
SRP54-210ENST00000556380 TMEM164Q5U3C3 297 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 CEACAM20Q6UY09 585 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 UBE2R2Q712K3 238 aaPredicted RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 TIPARPQ7Z3E1 657 aaKnown RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 CTAGE3PQ8IX95 158 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 SPACA3Q8IXA5 215 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 FAM20CQ8IXL6 584 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 DNAJC22Q8N4W6 341 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 EIF1ADQ8N9N8 165 aaKnown RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZSCAN1Q8NBB4 408 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZNF248Q8NDW4 579 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 OR2A1Q8NGT9 310 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZNF480Q8WV37 535 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ANKRD49Q8WVL7 239 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ANKRD7Q92527 254 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 SLC22A18Q96BI1 424 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ZNF501Q96CX3 271 aaPredicted RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 FCRL4Q96PJ5 515 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 OR6C1Q96RD1 312 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 CYTH2Q99418 400 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 OCSTAMPQ9BR26 566 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 RAB11FIP5Q9BXF6 653 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 DPH1Q9BZG8 443 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 ACSS3Q9H6R3 686 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 CAB39LQ9H9S4 337 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 PARVBQ9HBI1 364 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 POPDC3Q9HBV1 291 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 LNPEPQ9UIQ6 1025 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 PILRAQ9UKJ1 303 aa9.3□□□□□ -0.92
SRP54-210ENST00000556380 TMEM184BQ9Y519 407 aaPredicted RBP9.3□□□□□ -0.92
SRP54-210ENST00000556380 EFSO43281 561 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 HCRTR1O43613 425 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 FKBP9O95302 570 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 TIAF1O95411 115 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 DLGAP3O95886 979 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 VSIG8P0DPA2 414 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 SAT1P21673 171 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 ITPKBP27987 946 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 IMPA1P29218 277 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 OAS2P29728 719 aaKnown RBP9.29□□□□□ -0.92
SRP54-210ENST00000556380 SPRP35270 261 aaPredicted RBP9.29□□□□□ -0.92
SRP54-210ENST00000556380 GRIA3P42263 894 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 PNLIPRP1P54315 467 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 YBX1P67809 324 aaKnown RBP9.29□□□□□ -0.92
SRP54-210ENST00000556380 TUBB4BP68371 445 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 ACY1Q03154 408 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 TLE3Q04726 772 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 FOXM1Q08050 763 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 SP140Q13342 867 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 TUBB3Q13509 450 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 SLMAPQ14BN4 828 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 TGIF1Q15583 401 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 GPR19Q15760 415 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 PPP1R3AQ16821 1122 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 KIAA1614Q5VZ46 1190 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 FCRL6Q6DN72 434 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 SBSNQ6UWP8 590 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 CDHR3Q6ZTQ4 885 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 TAX1BP1Q86VP1 789 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 MYO1HQ8N1T3 1032 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 C19orf47Q8N9M1 422 aaKnown RBP9.29□□□□□ -0.92
SRP54-210ENST00000556380 TCTN2Q96GX1 697 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 UBXN10Q96LJ8 280 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 CCDC138Q96M89 665 aa9.29□□□□□ -0.92
SRP54-210ENST00000556380 KLHL25Q9H0H3 589 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms