RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 ACAT2Q9BWD1 397 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 GPR87Q9BY21 358 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 PSAT1Q9Y617 370 aa19.7■□□□□ 0.74
VTI1B-205ENST00000555543 CTSVO60911 334 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 FKBP9O95302 570 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 SLC16A8O95907 504 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 GCGRP47871 477 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 POLE2P56282 527 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 NFKB2Q00653 900 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 CBLBQ13191 982 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 IL10RAQ13651 578 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 PAQR3Q6TCH7 311 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 ZNF572Q7Z3I7 529 aaPredicted RBP19.69■□□□□ 0.74
VTI1B-205ENST00000555543 MCATQ8IVS2 390 aaKnown RBP19.69■□□□□ 0.74
VTI1B-205ENST00000555543 ZBED8Q8IZ13 594 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 ENDOVQ8N8Q3 282 aaKnown RBP19.69■□□□□ 0.74
VTI1B-205ENST00000555543 BBOF1Q8ND07 529 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 PPFIBP2Q8ND30 876 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 ZNF480Q8WV37 535 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 EEF1AKMT1Q8WVE0 214 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 DLG3Q92796 817 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 SLC7A5P2Q9GIP4 190 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 SLC6A20Q9NP91 592 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 INTS7Q9NVH2 962 aaKnown RBP19.69■□□□□ 0.74
VTI1B-205ENST00000555543 TAS2R13Q9NYV9 303 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 WHRNQ9P202 907 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 DHCR7Q9UBM7 475 aaKnown RBP19.69■□□□□ 0.74
VTI1B-205ENST00000555543 ADAMTS6Q9UKP5 1117 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 FARSAQ9Y285 508 aaKnown RBP19.69■□□□□ 0.74
VTI1B-205ENST00000555543 KLK4Q9Y5K2 254 aa19.69■□□□□ 0.74
VTI1B-205ENST00000555543 GCN1Q92616 2671 aaKnown RBP19.68■□□□□ 0.74
VTI1B-205ENST00000555543 CDC14CA4D256 554 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 EIF3FO00303 357 aaPredicted RBP19.68■□□□□ 0.74
VTI1B-205ENST00000555543 SYF2O95926 243 aaKnown RBP19.68■□□□□ 0.74
VTI1B-205ENST00000555543 PNLIPRP1P54315 467 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 RPS15P62841 145 aaKnown RBP19.68■□□□□ 0.74
VTI1B-205ENST00000555543 MGAT5Q09328 741 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 CALCOCO2Q13137 446 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 ARHGAP19Q14CB8 494 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 C1orf189Q5VU69 101 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 RHBDD2Q6NTF9 364 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 UBE2R2Q712K3 238 aaPredicted RBP19.68■□□□□ 0.74
VTI1B-205ENST00000555543 GPATCH11Q8N954 259 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 SMPDL3AQ92484 453 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 OLFM1Q99784 485 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 IRAK4Q9NWZ3 460 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 MOCS1Q9NZB8 636 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 AP1M2Q9Y6Q5 423 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 SEC16AO15027 2179 aa19.68■□□□□ 0.74
VTI1B-205ENST00000555543 TARM1B6A8C7 271 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 E7ENX8 843 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 NDC80O14777 642 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 TSPAN12O95859 305 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 HBQ1P09105 142 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 RAB40ALP0C0E4 278 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 SKIV2L2P42285 1042 aaKnown RBP19.67■□□□□ 0.74
VTI1B-205ENST00000555543 CCR10P46092 362 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 TAP2Q03519 686 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 C19orf57Q0VDD7 668 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 TSTA3Q13630 321 aaPredicted RBP19.67■□□□□ 0.74
VTI1B-205ENST00000555543 TRADDQ15628 312 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 HECTD2Q5U5R9 776 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 UGT3A1Q6NUS8 523 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 TLDC1Q6P9B6 456 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 CAPN12Q6ZSI9 719 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 LRRC56Q8IYG6 542 aaPredicted RBP19.67■□□□□ 0.74
VTI1B-205ENST00000555543 ZUFSPQ96AP4 578 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 GBP5Q96PP8 586 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 NLNQ9BYT8 704 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 STARD5Q9NSY2 213 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 GEMIN8Q9NWZ8 242 aaKnown RBP19.67■□□□□ 0.74
VTI1B-205ENST00000555543 ZFATQ9P243 1243 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 POLHQ9Y253 713 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 KCNMB2Q9Y691 235 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 SPTA1P02549 2419 aa19.67■□□□□ 0.74
VTI1B-205ENST00000555543 IGKV1-8A0A0C4DH67 115 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 OR2A25A4D2G3 310 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 ZBTB14O43829 449 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 PIAS1O75925 651 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 RECKO95980 971 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 ATXN8OSP0DMR3 200 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 FDXRP22570 491 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 IMPA1P29218 277 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 RPA3P35244 121 aaPredicted RBP19.66■□□□□ 0.74
VTI1B-205ENST00000555543 NCF4Q15080 339 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 UGT8Q16880 541 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 FRMPD2BQ6IN97 320 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 MBOAT1Q6ZNC8 495 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 SYVN1Q86TM6 617 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 APOBEC4Q8WW27 367 aaKnown RBP19.66■□□□□ 0.74
VTI1B-205ENST00000555543 LINGO1Q96FE5 620 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 ZNF285Q96NJ3 590 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 DPH2Q9BQC3 489 aaPredicted RBP19.66■□□□□ 0.74
VTI1B-205ENST00000555543 DPH7Q9BTV6 452 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 SYNPO2LQ9H987 977 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 SAYSD1Q9NPB0 183 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 SMYD2Q9NRG4 433 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 TAC3Q9UHF0 121 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 CDC23Q9UJX2 597 aa19.66■□□□□ 0.74
VTI1B-205ENST00000555543 TCFL5Q9UL49 500 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms